Gm55127 Gene Detail

Summary

• Symbol
  Gm55127
• Name
  predicted gene, 55127

• Feature Type
  rRNA gene
• IDs
  MGI:6846727
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:162916381-162916501 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846727	rRNA gene	ChrX:162916381-162916501 (+)
129S1/SvImJ	ENSMUSG00200027361	rRNA gene	ChrX:139638388-139638508 (+)
A/J	ENSMUSG00195016377	rRNA gene	ChrX:144758960-144759080 (+)
AKR/J	ENSMUSG00220032657	rRNA gene	ChrX:136637788-136637908 (+)
BALB/cJ	ENSMUSG00180041133	rRNA gene	ChrX:140148681-140148801 (+)
C3H/HeJ	ENSMUSG00175010646	rRNA gene	ChrX:144694484-144694604 (+)
C57BL/6NJ	ENSMUSG00215028600	rRNA gene	ChrX:140534575-140534695 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024500	rRNA gene	ChrX:142252412-142252532 (+)
CBA/J	ENSMUSG00210029662	rRNA gene	ChrX:142036722-142036842 (+)
DBA/2J	ENSMUSG00185030531	rRNA gene	ChrX:156965388-156965508 (+)
FVB/NJ	ENSMUSG00205034103	rRNA gene	ChrX:140622554-140622674 (+)
JF1/MsJ	ENSUMUG00000037798	rRNA gene	ChrX:177378834-177378954 (+)
LP/J	ENSMUSG00230026560	rRNA gene	ChrX:163755305-163755425 (+)
NOD/ShiLtJ	ENSMUSG00190035374	rRNA gene	ChrX:141141415-141141535 (+)
NZO/HlLtJ	ENSMUSG00225039029	rRNA gene	ChrX:167143784-167143904 (+)
PWK/PhJ	ENSLUMG00010042287	rRNA gene	ChrX:138454322-138454442 (+)
SPRET/EiJ	ENSMSPG00010020216	rRNA gene	ChrX:143680169-143680289 (+)
WSB/EiJ	ENSIUOG00005025892	rRNA gene	ChrX:141583287-141583407 (+)

Homology

• Gene Tree
  Gm55127
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076347 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076347	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182711	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;