Gm55121 Gene Detail

Summary

• Symbol
  Gm55121
• Name
  predicted gene, 55121

• Feature Type
  miRNA gene
• IDs
  MGI:6846715
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:51598612-51598688 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846715	miRNA gene	Chr6:51598612-51598688 (+)
129S1/SvImJ	ENSMUSG00200005664	miRNA gene	Chr6:48570918-48570994 (+)
A/J	ENSMUSG00195007090	miRNA gene	Chr6:48296843-48296919 (+)
AKR/J	ENSMUSG00220004048	miRNA gene	Chr6:47997849-47997925 (+)
BALB/cJ	ENSMUSG00180027015	miRNA gene	Chr6:48598610-48598686 (+)
C3H/HeJ	ENSMUSG00175017591	miRNA gene	Chr6:48365210-48365286 (+)
C57BL/6NJ	ENSMUSG00215010933	miRNA gene	Chr6:48551389-48551465 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005268	miRNA gene	Chr6:47848270-47848346 (+)
CBA/J	ENSMUSG00210018650	miRNA gene	Chr6:48409469-48409545 (+)
DBA/2J	ENSMUSG00185013840	miRNA gene	Chr6:48991743-48991819 (+)
FVB/NJ	ENSMUSG00205035037	miRNA gene	Chr6:48649854-48649930 (+)
JF1/MsJ	ENSUMUG00000016363	miRNA gene	Chr6:48352893-48352969 (+)
LP/J	ENSMUSG00230020124	miRNA gene	Chr6:50068225-50068301 (+)
NOD/ShiLtJ	ENSMUSG00190037308	miRNA gene	Chr6:48328943-48329019 (+)
NZO/HlLtJ	ENSMUSG00225013888	miRNA gene	Chr6:52049283-52049359 (+)
PWK/PhJ	ENSLUMG00010022139	miRNA gene	Chr6:48082478-48082554 (+)
SPRET/EiJ	ENSMSPG00010010593	miRNA gene	Chr6:48686030-48686106 (+)
WSB/EiJ	ENSIUOG00005029126	miRNA gene	Chr6:48672074-48672150 (+)

Homology

• Gene Tree
  Gm55121
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076122 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076122	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00020182716	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;