Gm55117 Pseudogene Detail

Summary

• Symbol
  Gm55117
• Name
  predicted gene, 55117

• Feature Type
  pseudogene
• IDs
  MGI:6846708
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:26362517-26362576 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846708	pseudogene	Chr7:26362517-26362576 (-)
129S1/SvImJ	ENSMUSG00200045640	pseudogene	Chr7:16157709-16157768 (-)
A/J	ENSMUSG00195053860	pseudogene	Chr7:18812046-18812105 (-)
AKR/J	ENSMUSG00220053459	pseudogene	Chr7:25624047-25624106 (+)
BALB/cJ	ENSMUSG00180053959	pseudogene	Chr7:16877382-16877441 (-)
C3H/HeJ	ENSMUSG00175053098	pseudogene	Chr7:17920375-17920434 (-)
C57BL/6NJ	ENSMUSG00215054965	pseudogene	Chr7:16163786-16163845 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052745	pseudogene	Chr7:17865054-17865113 (-)
CBA/J	ENSMUSG00210053696	pseudogene	Chr7:17106040-17106099 (-)
DBA/2J	ENSMUSG00185054648	pseudogene	Chr7:20315797-20315856 (-)
FVB/NJ	ENSMUSG00205053118	pseudogene	Chr7:16773959-16774018 (+)
JF1/MsJ	ENSUMUG00000057692	pseudogene	Chr7:24643371-24643430 (-)
LP/J	ENSMUSG00230053840	pseudogene	Chr7:25383730-25383789 (-)
NOD/ShiLtJ	ENSMUSG00190052673	pseudogene	Chr7:16557624-16557683 (-)
NZO/HlLtJ	ENSMUSG00225027395	pseudogene	Chr7:24261994-24262053 (-)
PWK/PhJ	ENSLUMG00010051516	pseudogene	Chr7:16571877-16571936 (-)
SPRET/EiJ	ENSMSPG00010051869	pseudogene	Chr7:16048234-16048290 (-)
WSB/EiJ	ENSIUOG00005053778	pseudogene	Chr7:10801665-10801724 (-)

Homology

• Gene Tree
  Gm55117
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118648 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118648	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00000239477	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;