Gm55112 Gene Detail

Summary

• Symbol
  Gm55112
• Name
  predicted gene, 55112

• Feature Type
  snoRNA gene
• IDs
  MGI:6846698
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:109624841-109624912 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846698	snoRNA gene	Chr12:109624841-109624912 (+)
129S1/SvImJ	ENSMUSG00200025917	snoRNA gene	Chr12:101398600-101398671 (+)
A/J	ENSMUSG00195048149	snoRNA gene	Chr12:103930581-103930652 (+)
AKR/J	ENSMUSG00220045224	snoRNA gene	Chr12:101812904-101812975 (+)
BALB/cJ	ENSMUSG00180051193	snoRNA gene	Chr12:103161754-103161825 (+)
C3H/HeJ	ENSMUSG00175041098	snoRNA gene	Chr12:105740855-105740926 (+)
C57BL/6NJ	ENSMUSG00215051190	snoRNA gene	Chr12:102434705-102434776 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019656	snoRNA gene	Chr12:101912871-101912942 (+)
CBA/J	ENSMUSG00210034835	snoRNA gene	Chr12:102802310-102802381 (+)
DBA/2J	ENSMUSG00185028495	snoRNA gene	Chr12:104620965-104621036 (+)
FVB/NJ	ENSMUSG00205040229	snoRNA gene	Chr12:101846614-101846685 (+)
JF1/MsJ	ENSUMUG00000024861	snoRNA gene	Chr12:109378669-109378741 (+)
LP/J	ENSMUSG00230031557	snoRNA gene	Chr12:111663494-111663565 (+)
NOD/ShiLtJ	ENSMUSG00190030191	snoRNA gene	Chr12:83376633-83376705 (-)
NZO/HlLtJ	ENSMUSG00225039374	snoRNA gene	Chr12:113422362-113422433 (+)
PWK/PhJ	ENSLUMG00010044977	snoRNA gene	Chr12:102851119-102851191 (+)
SPRET/EiJ	ENSMSPG00010019778	snoRNA gene	Chr12:105133967-105134038 (+)
WSB/EiJ	ENSIUOG00005009765	snoRNA gene	Chr12:101844064-101844135 (+)

Homology

• Gene Tree
  Gm55112
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074888 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074888	Ensembl Gene Model | MGI Sequence Detail	72	C57BL/6J
transcript	ENSMUST00020182652	Ensembl | MGI Sequence Detail	72	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;