Gm55088 Gene Detail

Summary

• Symbol
  Gm55088
• Name
  predicted gene, 55088

• Feature Type
  miRNA gene
• IDs
  MGI:6846650
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:26230609-26230718 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846650	miRNA gene	Chr7:26230609-26230718 (+)
129S1/SvImJ	ENSMUSG00200045634	miRNA gene	Chr7:16025019-16025128 (+)
A/J	ENSMUSG00195053856	miRNA gene	Chr7:18677677-18677786 (+)
AKR/J	ENSMUSG00220053457	miRNA gene	Chr7:25758563-25758672 (-)
BALB/cJ	ENSMUSG00180053956	miRNA gene	Chr7:16743014-16743123 (+)
C3H/HeJ	ENSMUSG00175053094	miRNA gene	Chr7:17787869-17787978 (+)
C57BL/6NJ	ENSMUSG00215054964	miRNA gene	Chr7:16031242-16031351 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052740	miRNA gene	Chr7:17742947-17743056 (+)
CBA/J	ENSMUSG00210053693	miRNA gene	Chr7:16973537-16973646 (+)
DBA/2J	ENSMUSG00185054644	miRNA gene	Chr7:20187496-20187605 (+)
FVB/NJ	ENSMUSG00205053114	miRNA gene	Chr7:16906448-16906557 (-)
JF1/MsJ	ENSUMUG00000057689	miRNA gene	Chr7:24519674-24519783 (+)
LP/J	ENSMUSG00230053819	miRNA gene	Chr7:25251058-25251167 (+)
NOD/ShiLtJ	ENSMUSG00190052666	miRNA gene	Chr7:16430941-16431050 (+)
NZO/HlLtJ	ENSMUSG00225027366	miRNA gene	Chr7:24129466-24129575 (+)
PWK/PhJ	ENSLUMG00010051510	miRNA gene	Chr7:16448545-16448654 (+)
SPRET/EiJ	ENSMSPG00010051868	miRNA gene	Chr7:15894060-15894169 (+)
SPRET/EiJ	ENSMSPG00010008508	miRNA gene	Chr3:62177575-62177684 (+)
WSB/EiJ	ENSIUOG00005053206	miRNA gene	Chr7:6545153-6545262 (+)

Homology

• Gene Tree
  Gm55088
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002075792 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075792	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182637	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;