Gm55084 Gene Detail

Summary

• Symbol
  Gm55084
• Name
  predicted gene, 55084

• Feature Type
  rRNA gene
• IDs
  MGI:6846642
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:88364434-88364533 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846642	rRNA gene	Chr14:88364434-88364533 (+)
129S1/SvImJ	ENSMUSG00200012942	rRNA gene	Chr14:76829593-76829692 (+)
A/J	ENSMUSG00195011392	rRNA gene	Chr14:77086147-77086246 (+)
AKR/J	ENSMUSG00220008326	rRNA gene	Chr14:76458277-76458376 (+)
BALB/cJ	ENSMUSG00180010261	rRNA gene	Chr14:76582909-76583008 (+)
C3H/HeJ	ENSMUSG00175009546	rRNA gene	Chr14:78431366-78431465 (+)
C57BL/6NJ	ENSMUSG00215004856	rRNA gene	Chr14:76578821-76578920 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002468	rRNA gene	Chr14:78150399-78150498 (+)
CBA/J	ENSMUSG00210004936	rRNA gene	Chr14:77137803-77137902 (+)
DBA/2J	ENSMUSG00185015088	rRNA gene	Chr14:82251906-82252005 (+)
FVB/NJ	ENSMUSG00205010173	rRNA gene	Chr14:76256502-76256601 (+)
JF1/MsJ	ENSUMUG00000013324	rRNA gene	Chr14:93254851-93254950 (+)
LP/J	ENSMUSG00230005392	rRNA gene	Chr14:94129260-94129359 (+)
NOD/ShiLtJ	ENSMUSG00190002016	rRNA gene	Chr14:76824262-76824361 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010002207	rRNA gene	Chr14:76135220-76135319 (+)
SPRET/EiJ	ENSMSPG00010000259	rRNA gene	Chr14:79862730-79862829 (+)
WSB/EiJ	ENSIUOG00005004612	rRNA gene	Chr14:76130601-76130700 (+)

Homology

• Gene Tree
  Gm55084
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075121 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075121	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020182069	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;