Gm55082 Gene Detail

Summary

• Symbol
  Gm55082
• Name
  predicted gene, 55082

• Feature Type
  miRNA gene
• IDs
  MGI:6846638
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:22929503-22929608 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846638	miRNA gene	Chr16:22929503-22929608 (+)
129S1/SvImJ	ENSMUSG00200046907	miRNA gene	Chr16:19933344-19933449 (+)
A/J	ENSMUSG00195036927	miRNA gene	Chr16:19487835-19487940 (+)
AKR/J	ENSMUSG00220045712	miRNA gene	Chr16:19807248-19807353 (+)
BALB/cJ	ENSMUSG00180042217	miRNA gene	Chr16:19728442-19728547 (+)
C3H/HeJ	ENSMUSG00175050643	miRNA gene	Chr16:19873360-19873465 (+)
C57BL/6NJ	ENSMUSG00215041812	miRNA gene	Chr16:19600557-19600662 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035881	miRNA gene	Chr16:20203846-20203951 (+)
CBA/J	ENSMUSG00210047805	miRNA gene	Chr16:19895046-19895151 (+)
DBA/2J	ENSMUSG00185035897	miRNA gene	Chr16:19833836-19833941 (+)
FVB/NJ	ENSMUSG00205048978	miRNA gene	Chr16:19834496-19834601 (+)
JF1/MsJ	ENSUMUG00000053970	miRNA gene	Chr16:20055126-20055231 (+)
LP/J	ENSMUSG00230033487	miRNA gene	Chr16:22412854-22412959 (+)
NOD/ShiLtJ	ENSMUSG00190050152	miRNA gene	Chr16:19975244-19975349 (+)
NZO/HlLtJ	ENSMUSG00225038835	miRNA gene	Chr16:25663989-25664094 (+)
PWK/PhJ	ENSLUMG00010050269	miRNA gene	Chr16:19878527-19878632 (+)
SPRET/EiJ	ENSMSPG00010046947	miRNA gene	Chr16:19760975-19761080 (+)
WSB/EiJ	ENSIUOG00005043333	miRNA gene	Chr16:20079460-20079565 (+)

Homology

• Gene Tree
  Gm55082
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076817 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076817	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020183230	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;