Gm55081 Gene Detail

Summary

• Symbol
  Gm55081
• Name
  predicted gene, 55081

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846636
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:42185771-42186015 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846636	unclassified non-coding RNA gene	Chr10:42185771-42186015 (+)
129S1/SvImJ	ENSMUSG00200009288	unclassified non-coding RNA gene	Chr10:39070452-39070696 (+)
A/J	ENSMUSG00195018492	unclassified non-coding RNA gene	Chr10:39347418-39347662 (+)
AKR/J	ENSMUSG00220028408	unclassified non-coding RNA gene	Chr10:39023876-39024120 (+)
BALB/cJ	ENSMUSG00180017453	unclassified non-coding RNA gene	Chr10:39431576-39431820 (+)
C3H/HeJ	ENSMUSG00175012024	unclassified non-coding RNA gene	Chr10:39226703-39226947 (+)
C57BL/6NJ	ENSMUSG00215010545	unclassified non-coding RNA gene	Chr10:38976052-38976296 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029061	unclassified non-coding RNA gene	Chr10:39422916-39423160 (+)
CBA/J	ENSMUSG00210026184	unclassified non-coding RNA gene	Chr10:39120226-39120470 (+)
DBA/2J	ENSMUSG00185007550	unclassified non-coding RNA gene	Chr10:39272803-39273047 (+)
FVB/NJ	ENSMUSG00205013655	unclassified non-coding RNA gene	Chr10:39188042-39188286 (+)
JF1/MsJ	ENSUMUG00000038013	unclassified non-coding RNA gene	Chr10:39061001-39061245 (+)
LP/J	ENSMUSG00230006282	unclassified non-coding RNA gene	Chr10:41060241-41060485 (+)
NOD/ShiLtJ	ENSMUSG00190032554	unclassified non-coding RNA gene	Chr10:39400928-39401172 (+)
NZO/HlLtJ	ENSMUSG00225019592	unclassified non-coding RNA gene	Chr10:45365790-45366034 (+)
PWK/PhJ	ENSLUMG00010007923	unclassified non-coding RNA gene	Chr10:39175903-39176147 (+)
SPRET/EiJ	ENSMSPG00010021347	unclassified non-coding RNA gene	Chr10:40205381-40205624 (+)
WSB/EiJ	ENSIUOG00005015793	unclassified non-coding RNA gene	Chr10:38947167-38947411 (+)

Homology

• Gene Tree
  Gm55081
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075014 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075014	Ensembl Gene Model | MGI Sequence Detail	245	C57BL/6J
transcript	ENSMUST00020182634	Ensembl | MGI Sequence Detail	245	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55081:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr93080	Chr10:42184416-42184421 (+)	-1,352 bp