Gm55073 Gene Detail

Summary

• Symbol
  Gm55073
• Name
  predicted gene, 55073

• Feature Type
  rRNA gene
• IDs
  MGI:6846620
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:94803762-94803904 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846620	rRNA gene	Chr6:94803762-94803904 (-)
129S1/SvImJ	ENSMUSG00200046183	rRNA gene	Chr6:91788085-91788227 (-)
A/J	ENSMUSG00195042215	rRNA gene	Chr6:91505748-91505890 (-)
AKR/J	ENSMUSG00220035781	rRNA gene	Chr6:90393714-90393856 (-)
BALB/cJ	ENSMUSG00180017872	rRNA gene	Chr6:91879154-91879296 (-)
C3H/HeJ	ENSMUSG00175025927	rRNA gene	Chr6:85550728-85550870 (+)
C57BL/6NJ	ENSMUSG00215038211	rRNA gene	Chr6:91858818-91858960 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019106	rRNA gene	Chr6:91996528-91996670 (-)
CBA/J	ENSMUSG00210045769	rRNA gene	Chr6:91672872-91673014 (-)
DBA/2J	ENSMUSG00185025961	rRNA gene	Chr6:92190872-92191014 (-)
FVB/NJ	ENSMUSG00205043597	rRNA gene	Chr6:90861820-90861962 (-)
JF1/MsJ	ENSUMUG00000046577	rRNA gene	Chr6:91146570-91146712 (-)
LP/J	ENSMUSG00230012955	rRNA gene	Chr6:93342790-93342932 (-)
NOD/ShiLtJ	ENSMUSG00190044794	rRNA gene	Chr6:91283030-91283172 (-)
NZO/HlLtJ	ENSMUSG00225040095	rRNA gene	Chr6:95345615-95345757 (-)
PWK/PhJ	ENSLUMG00010034511	rRNA gene	Chr6:90587405-90587547 (-)
SPRET/EiJ	ENSMSPG00010019454	rRNA gene	Chr6:92865923-92866065 (-)
WSB/EiJ	ENSIUOG00005032737	rRNA gene	Chr6:92272369-92272511 (-)

Homology

• Gene Tree
  Gm55073
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075637 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075637	Ensembl Gene Model | MGI Sequence Detail	143	C57BL/6J
transcript	ENSMUST00020183534	Ensembl | MGI Sequence Detail	143	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55073:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr62185	Chr6:94803862-94803870 (-)	38 bp