Gm55054 Gene Detail

Summary

• Symbol
  Gm55054
• Name
  predicted gene, 55054

• Feature Type
  snRNA gene
• IDs
  MGI:6846582
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:106817865-106817986 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846582	snRNA gene	Chr5:106817865-106817986 (+)
129S1/SvImJ	ENSMUSG00200006464	snRNA gene	Chr5:100552021-100552142 (+)
A/J	ENSMUSG00195035596	snRNA gene	Chr5:100014357-100014478 (+)
AKR/J	ENSMUSG00220040245	snRNA gene	Chr5:99570629-99570750 (+)
BALB/cJ	ENSMUSG00180034913	snRNA gene	Chr5:100166483-100166604 (+)
C3H/HeJ	ENSMUSG00175050075	snRNA gene	Chr5:102205183-102205304 (+)
C57BL/6NJ	ENSMUSG00215023534	snRNA gene	Chr5:100219777-100219898 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024824	snRNA gene	Chr5:99438370-99438491 (+)
CBA/J	ENSMUSG00210035738	snRNA gene	Chr5:100962799-100962920 (+)
DBA/2J	ENSMUSG00185049631	snRNA gene	Chr5:103876208-103876329 (+)
FVB/NJ	ENSMUSG00205043094	snRNA gene	Chr5:99891547-99891668 (+)
JF1/MsJ	ENSUMUG00000019832	snRNA gene	Chr5:106923707-106923828 (+)
LP/J	ENSMUSG00230031826	snRNA gene	Chr5:108093277-108093398 (+)
NOD/ShiLtJ	ENSMUSG00190027172	snRNA gene	Chr5:99887963-99888084 (+)
NZO/HlLtJ	ENSMUSG00225026294	snRNA gene	Chr5:115715005-115715126 (+)
PWK/PhJ	ENSLUMG00010015845	snRNA gene	Chr5:98928976-98929097 (+)
SPRET/EiJ	ENSMSPG00010048214	snRNA gene	Chr5:102020472-102020593 (+)
WSB/EiJ	ENSIUOG00005032358	snRNA gene	Chr5:102602414-102602535 (+)

Homology

• Gene Tree
  Gm55054
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076219 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076219	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00020183052	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;