Gm55053 Gene Detail

Summary

• Symbol
  Gm55053
• Name
  predicted gene, 55053

• Feature Type
  miRNA gene
• IDs
  MGI:6846580
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:92423076-92423169 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846580	miRNA gene	Chr10:92423076-92423169 (+)
129S1/SvImJ	ENSMUSG00200030658	miRNA gene	Chr10:88933882-88933975 (+)
A/J	ENSMUSG00195022848	miRNA gene	Chr10:89378751-89378844 (+)
AKR/J	ENSMUSG00220022891	miRNA gene	Chr10:88946276-88946369 (+)
BALB/cJ	ENSMUSG00180034074	miRNA gene	Chr10:89381514-89381607 (+)
C3H/HeJ	ENSMUSG00175024067	miRNA gene	Chr10:89277516-89277609 (+)
C57BL/6NJ	ENSMUSG00215028652	miRNA gene	Chr10:88935038-88935131 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036982	miRNA gene	Chr10:88665204-88665297 (+)
CBA/J	ENSMUSG00210036045	miRNA gene	Chr10:89117527-89117620 (+)
DBA/2J	ENSMUSG00185044005	miRNA gene	Chr10:89329170-89329263 (+)
FVB/NJ	ENSMUSG00205022319	miRNA gene	Chr10:89018648-89018741 (+)
JF1/MsJ	ENSUMUG00000030521	miRNA gene	Chr10:90730981-90731074 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190018445	miRNA gene	Chr10:89363350-89363443 (+)
NZO/HlLtJ	ENSMUSG00225021773	miRNA gene	Chr10:95495716-95495809 (+)
PWK/PhJ	ENSLUMG00010024898	miRNA gene	Chr10:89003878-89003971 (+)
SPRET/EiJ	ENSMSPG00010035059	miRNA gene	Chr10:90626284-90626377 (+)
WSB/EiJ	ENSIUOG00005040500	miRNA gene	Chr10:89065569-89065662 (+)

Homology

• Gene Tree
  Gm55053
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076919 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076919	Ensembl Gene Model | MGI Sequence Detail	94	C57BL/6J
transcript	ENSMUST00020183778	Ensembl | MGI Sequence Detail	94	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;