Gm55042 Gene Detail

Summary

• Symbol
  Gm55042
• Name
  predicted gene, 55042

• Feature Type
  rRNA gene
• IDs
  MGI:6846558
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:100347565-100347674 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846558	rRNA gene	Chr15:100347565-100347674 (+)
129S1/SvImJ	ENSMUSG00200052839	rRNA gene	Chr15:97553203-97553312 (+)
A/J	ENSMUSG00195046317	rRNA gene	Chr15:97430927-97431036 (+)
AKR/J	ENSMUSG00220050877	rRNA gene	Chr15:97424165-97424274 (+)
BALB/cJ	ENSMUSG00180047316	rRNA gene	Chr15:97329020-97329129 (+)
C3H/HeJ	ENSMUSG00175047548	rRNA gene	Chr15:97610911-97611020 (+)
C57BL/6NJ	ENSMUSG00215051433	rRNA gene	Chr15:97386004-97386113 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048510	rRNA gene	Chr15:96867417-96867526 (+)
CBA/J	ENSMUSG00210032672	rRNA gene	Chr15:97385868-97385977 (+)
DBA/2J	ENSMUSG00185043258	rRNA gene	Chr15:97430563-97430672 (+)
FVB/NJ	ENSMUSG00205047451	rRNA gene	Chr15:97135016-97135125 (+)
JF1/MsJ	ENSUMUG00000057363	rRNA gene	Chr15:96895319-96895428 (+)
LP/J	ENSMUSG00230041089	rRNA gene	Chr15:100776538-100776647 (+)
NOD/ShiLtJ	ENSMUSG00190049577	rRNA gene	Chr15:97361813-97361922 (+)
NZO/HlLtJ	ENSMUSG00225043229	rRNA gene	Chr15:100979943-100980052 (+)
PWK/PhJ	ENSLUMG00010050462	rRNA gene	Chr15:97098219-97098328 (+)
SPRET/EiJ	ENSMSPG00010049993	rRNA gene	Chr15:98917825-98917934 (+)
WSB/EiJ	ENSIUOG00005042299	rRNA gene	Chr15:97516975-97517084 (+)

Homology

• Gene Tree
  Gm55042
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076914 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076914	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182959	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;