Gm55039 Gene Detail

Summary

• Symbol
  Gm55039
• Name
  predicted gene, 55039

• Feature Type
  miRNA gene
• IDs
  MGI:6846552
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:51204600-51204665 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846552	miRNA gene	Chr3:51204600-51204665 (+)
129S1/SvImJ	ENSMUSG00200000480	miRNA gene	Chr3:48028537-48028602 (+)
A/J	ENSMUSG00195000816	miRNA gene	Chr3:47991027-47991092 (+)
AKR/J	ENSMUSG00220015950	miRNA gene	Chr3:48045504-48045569 (+)
BALB/cJ	ENSMUSG00180000649	miRNA gene	Chr3:48068331-48068396 (+)
C3H/HeJ	ENSMUSG00175002164	miRNA gene	Chr3:47899238-47899303 (+)
C57BL/6NJ	ENSMUSG00215000604	miRNA gene	Chr3:48337832-48337897 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010002	miRNA gene	Chr3:47716570-47716635 (+)
CBA/J	ENSMUSG00210000915	miRNA gene	Chr3:48012119-48012184 (+)
DBA/2J	ENSMUSG00185000424	miRNA gene	Chr3:48253370-48253435 (+)
FVB/NJ	ENSMUSG00205009776	miRNA gene	Chr3:47231463-47231528 (+)
JF1/MsJ	ENSUMUG00000029016	miRNA gene	Chr3:47667425-47667491 (+)
LP/J	ENSMUSG00230000375	miRNA gene	Chr3:50200749-50200814 (+)
NOD/ShiLtJ	ENSMUSG00190000673	miRNA gene	Chr3:48383309-48383374 (+)
NZO/HlLtJ	ENSMUSG00225018194	miRNA gene	Chr3:52827917-52827982 (+)
PWK/PhJ	ENSLUMG00010010311	miRNA gene	Chr3:47833590-47833656 (+)
SPRET/EiJ	ENSMSPG00010007593	miRNA gene	Chr3:48490480-48490549 (+)
WSB/EiJ	ENSIUOG00005000456	miRNA gene	Chr3:48180185-48180250 (+)

Homology

• Gene Tree
  Gm55039
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076110 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076110	Ensembl Gene Model | MGI Sequence Detail	66	C57BL/6J
transcript	ENSMUST00020183370	Ensembl | MGI Sequence Detail	66	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;