Gm55038 Gene Detail

Summary

• Symbol
  Gm55038
• Name
  predicted gene, 55038

• Feature Type
  miRNA gene
• IDs
  MGI:6846550
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:60188968-60189060 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846550	miRNA gene	ChrX:60188968-60189060 (+)
129S1/SvImJ	ENSMUSG00200016069	miRNA gene	ChrX:42442258-42442348 (+)
A/J	ENSMUSG00195009505	miRNA gene	ChrX:45968533-45968625 (+)
AKR/J	ENSMUSG00220024621	miRNA gene	ChrX:41520432-41520524 (+)
BALB/cJ	ENSMUSG00180007087	miRNA gene	ChrX:42589206-42589298 (+)
C3H/HeJ	ENSMUSG00175009272	miRNA gene	ChrX:46153220-46153312 (+)
C57BL/6NJ	ENSMUSG00215008134	miRNA gene	ChrX:42748095-42748187 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019694	miRNA gene	ChrX:44353852-44353944 (+)
CBA/J	ENSMUSG00210018758	miRNA gene	ChrX:42948550-42948642 (+)
DBA/2J	ENSMUSG00185036397	miRNA gene	ChrX:55234422-55234514 (+)
FVB/NJ	ENSMUSG00205009257	miRNA gene	ChrX:42567053-42567145 (+)
JF1/MsJ	ENSUMUG00000028712	miRNA gene	ChrX:76174249-76174341 (+)
LP/J	ENSMUSG00230019403	miRNA gene	ChrX:61791305-61791397 (+)
NOD/ShiLtJ	ENSMUSG00190013793	miRNA gene	ChrX:42251957-42252051 (+)
NZO/HlLtJ	ENSMUSG00225032439	miRNA gene	ChrX:67036785-67036877 (+)
PWK/PhJ	ENSLUMG00010027032	miRNA gene	ChrX:42109285-42109377 (+)
SPRET/EiJ	ENSMSPG00010004649	miRNA gene	ChrX:44841303-44841391 (+)
WSB/EiJ	ENSIUOG00005012155	miRNA gene	ChrX:43285589-43285679 (+)

Homology

• Gene Tree
  Gm55038
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076010 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076010	Ensembl Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	ENSMUST00020182598	Ensembl | MGI Sequence Detail	93	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;