Gm55027 Gene Detail

Summary

• Symbol
  Gm55027
• Name
  predicted gene, 55027

• Feature Type
  miRNA gene
• IDs
  MGI:6846528
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:129477782-129477890 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846528	miRNA gene	Chr3:129477782-129477890 (-)
129S1/SvImJ	ENSMUSG00200004069	miRNA gene	Chr3:126240857-126240970 (-)
A/J	ENSMUSG00195008653	miRNA gene	Chr3:126365337-126365450 (-)
AKR/J	ENSMUSG00220022875	miRNA gene	Chr3:124797056-124797169 (-)
BALB/cJ	ENSMUSG00180003915	miRNA gene	Chr3:126294026-126294139 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215020867	miRNA gene	Chr3:126627059-126627167 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003960	miRNA gene	Chr3:126940957-126941155 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185026388	miRNA gene	Chr3:127081868-127081981 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230004773	miRNA gene	Chr3:129061184-129061297 (-)
NOD/ShiLtJ	ENSMUSG00190001557	miRNA gene	Chr3:127474884-127474997 (-)
NZO/HlLtJ	ENSMUSG00225004259	miRNA gene	Chr3:131516604-131516717 (-)
PWK/PhJ	ENSLUMG00010016015	miRNA gene	Chr3:125838474-125838587 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005017149	miRNA gene	Chr3:126592081-126592194 (-)

Homology

• Gene Tree
  Gm55027
  

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00002075346 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075346	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020181734	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;