Gm55021 Gene Detail

Summary

• Symbol
  Gm55021
• Name
  predicted gene, 55021

• Feature Type
  miRNA gene
• IDs
  MGI:6846516
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:5471739-5471840 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846516	miRNA gene	Chr17:5471739-5471840 (+)
129S1/SvImJ	ENSMUSG00200035155	miRNA gene	Chr17:2367493-2367593 (+)
A/J	ENSMUSG00195023730	miRNA gene	Chr17:2361385-2361486 (+)
AKR/J	ENSMUSG00220028062	miRNA gene	Chr17:2556838-2556939 (+)
BALB/cJ	ENSMUSG00180028757	miRNA gene	Chr17:2373173-2373274 (+)
C3H/HeJ	ENSMUSG00175035149	miRNA gene	Chr17:2333179-2333280 (+)
C57BL/6NJ	ENSMUSG00215032408	miRNA gene	Chr17:2354033-2354134 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210041330	miRNA gene	Chr17:2350138-2350239 (+)
DBA/2J	ENSMUSG00185023564	miRNA gene	Chr17:2453358-2453459 (+)
FVB/NJ	ENSMUSG00205009754	miRNA gene	Chr17:2408298-2408399 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230034874	miRNA gene	Chr17:3550568-3550669 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225029097	miRNA gene	Chr17:5854551-5854652 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005014242	miRNA gene	Chr17:2401739-2401840 (+)

Homology

• Gene Tree
  Gm55021
  

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00002075241 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075241	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020183601	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;