Gm55020 Gene Detail

Summary

• Symbol
  Gm55020
• Name
  predicted gene, 55020

• Feature Type
  rRNA gene
• IDs
  MGI:6846514
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:5141900-5142021 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846514	rRNA gene	Chr16:5141900-5142021 (-)
129S1/SvImJ	ENSMUSG00200012558	rRNA gene	Chr16:2134017-2134138 (-)
A/J	ENSMUSG00195012103	rRNA gene	Chr16:1682917-1683038 (-)
AKR/J	ENSMUSG00220017772	rRNA gene	Chr16:1983418-1983539 (-)
BALB/cJ	ENSMUSG00180009212	rRNA gene	Chr16:1934976-1935097 (-)
C3H/HeJ	ENSMUSG00175031508	rRNA gene	Chr16:2126196-2126317 (-)
C57BL/6NJ	ENSMUSG00215025751	rRNA gene	Chr16:1807468-1807589 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033186	rRNA gene	Chr16:2009500-2009621 (-)
CBA/J	ENSMUSG00210012282	rRNA gene	Chr16:2143569-2143690 (-)
DBA/2J	ENSMUSG00185010319	rRNA gene	Chr16:2088698-2088819 (-)
FVB/NJ	ENSMUSG00205013965	rRNA gene	Chr16:2005440-2005561 (-)
JF1/MsJ	ENSUMUG00000041049	rRNA gene	Chr16:2135319-2135440 (-)
LP/J	ENSMUSG00230012749	rRNA gene	Chr16:4629706-4629827 (-)
NOD/ShiLtJ	ENSMUSG00190027141	rRNA gene	Chr16:2167957-2168078 (-)
NZO/HlLtJ	ENSMUSG00225023288	rRNA gene	Chr16:7872051-7872172 (-)
PWK/PhJ	ENSLUMG00010018318	rRNA gene	Chr16:2001313-2001434 (-)
SPRET/EiJ	ENSMSPG00010018657	rRNA gene	Chr16:1932796-1932917 (-)
WSB/EiJ	ENSIUOG00005017116	rRNA gene	Chr16:2122894-2123015 (-)

Homology

• Gene Tree
  Gm55020
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076865 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076865	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00020183717	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;