Gm55016 Gene Detail

Summary

• Symbol
  Gm55016
• Name
  predicted gene, 55016

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846506
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:161470876-161471176 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846506	unclassified non-coding RNA gene	ChrX:161470876-161471176 (+)
129S1/SvImJ	ENSMUSG00200027191	unclassified non-coding RNA gene	ChrX:138197893-138198193 (+)
A/J	ENSMUSG00195038781	unclassified non-coding RNA gene	ChrX:143318230-143318530 (+)
AKR/J	ENSMUSG00220031428	unclassified non-coding RNA gene	ChrX:135173796-135174096 (+)
BALB/cJ	ENSMUSG00180042423	unclassified non-coding RNA gene	ChrX:138690093-138690393 (+)
C3H/HeJ	ENSMUSG00175027888	unclassified non-coding RNA gene	ChrX:143253973-143254273 (+)
C57BL/6NJ	ENSMUSG00215027357	unclassified non-coding RNA gene	ChrX:139088318-139088618 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034445	unclassified non-coding RNA gene	ChrX:140825108-140825408 (+)
CBA/J	ENSMUSG00210039280	unclassified non-coding RNA gene	ChrX:140596232-140596532 (+)
DBA/2J	ENSMUSG00185031691	unclassified non-coding RNA gene	ChrX:155524853-155525153 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000038317	unclassified non-coding RNA gene	ChrX:175918601-175918901 (+)
LP/J	ENSMUSG00230026545	unclassified non-coding RNA gene	ChrX:162314183-162314483 (+)
NOD/ShiLtJ	ENSMUSG00190034822	unclassified non-coding RNA gene	ChrX:139701065-139701365 (+)
NZO/HlLtJ	ENSMUSG00225039007	unclassified non-coding RNA gene	ChrX:165703448-165703748 (+)
PWK/PhJ	ENSLUMG00010043433	unclassified non-coding RNA gene	ChrX:136995963-136996263 (+)
SPRET/EiJ	ENSMSPG00010019306	unclassified non-coding RNA gene	ChrX:142131814-142132114 (+)
WSB/EiJ	ENSIUOG00005026085	unclassified non-coding RNA gene	ChrX:139999008-139999308 (+)

Homology

• Gene Tree
  Gm55016
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076833 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076833	Ensembl Gene Model | MGI Sequence Detail	301	C57BL/6J
transcript	ENSMUST00020182283	Ensembl | MGI Sequence Detail	301	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;