Gm55015 Gene Detail

Summary

• Symbol
  Gm55015
• Name
  predicted gene, 55015

• Feature Type
  miRNA gene
• IDs
  MGI:6846504
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:5045784-5045893 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  26 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846504	miRNA gene	Chr16:5045784-5045893 (+)
129S1/SvImJ	ENSMUSG00200012386	miRNA gene	Chr16:2037717-2037826 (+)
A/J	ENSMUSG00195011697	miRNA gene	Chr16:1587080-1587189 (+)
AKR/J	ENSMUSG00220017389	miRNA gene	Chr16:1887113-1887222 (+)
BALB/cJ	ENSMUSG00180008671	miRNA gene	Chr16:1838689-1838798 (+)
BALB/cJ	ENSMUSG00180003075	miRNA gene	Chr8:45741141-45741245 (-)
C3H/HeJ	ENSMUSG00175030199	miRNA gene	Chr16:2029925-2030034 (+)
C57BL/6NJ	ENSMUSG00215021355	miRNA gene	Chr16:1711171-1711280 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031464	miRNA gene	Chr16:1912486-1912595 (+)
CBA/J	ENSMUSG00210012110	miRNA gene	Chr16:2047273-2047382 (+)
DBA/2J	ENSMUSG00185010337	miRNA gene	Chr16:1992425-1992534 (+)
FVB/NJ	ENSMUSG00205013249	miRNA gene	Chr16:1909384-1909493 (+)
JF1/MsJ	ENSUMUG00000037221	miRNA gene	Chr16:2035107-2035216 (+)
LP/J	ENSMUSG00230012332	miRNA gene	Chr16:4533421-4533530 (+)
NOD/ShiLtJ	ENSMUSG00190027458	miRNA gene	Chr16:2071901-2072010 (+)
NZO/HlLtJ	ENSMUSG00225023233	miRNA gene	Chr16:7775765-7775874 (+)
PWK/PhJ	ENSLUMG00010018162	miRNA gene	Chr16:1901251-1901360 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005017208	miRNA gene	Chr16:2026616-2026725 (+)

Homology

• Gene Tree
  Gm55015
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075571 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075571	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183647	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;