Gm55014 Gene Detail

Summary

• Symbol
  Gm55014
• Name
  predicted gene, 55014

• Feature Type
  miRNA gene
• IDs
  MGI:6846502
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:5041228-5041337 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  99

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846502	miRNA gene	Chr16:5041228-5041337 (+)
129S1/SvImJ	ENSMUSG00200012402	miRNA gene	Chr16:2033161-2033270 (+)
129S1/SvImJ	ENSMUSG00200000311	miRNA gene	Chr1:98423989-98424098 (+)
129S1/SvImJ	ENSMUSG00200000774	miRNA gene	Chr3:46152278-46152387 (-)
129S1/SvImJ	ENSMUSG00200000310	miRNA gene	Chr1:98419425-98419534 (+)
129S1/SvImJ	ENSMUSG00200023013	miRNA gene	Chr7:104063099-104063208 (+)
129S1/SvImJ	ENSMUSG00200023354	miRNA gene	Chr9:7945092-7945201 (+)
A/J	ENSMUSG00195011698	miRNA gene	Chr16:1582524-1582633 (+)
A/J	ENSMUSG00195020146	miRNA gene	Chr9:7839714-7839823 (+)
A/J	ENSMUSG00195054143	miRNA gene	Chr7:10921054-10921163 (-)
A/J	ENSMUSG00195000560	miRNA gene	Chr1:97926372-97926481 (+)
A/J	ENSMUSG00195000559	miRNA gene	Chr1:97921807-97921916 (+)
AKR/J	ENSMUSG00220033640	miRNA gene	Chr7:9257586-9257695 (-)
AKR/J	ENSMUSG00220008205	miRNA gene	Chr4:72624998-72625107 (+)
AKR/J	ENSMUSG00220000375	miRNA gene	Chr1:98145266-98145375 (+)
AKR/J	ENSMUSG00220017399	miRNA gene	Chr16:1882557-1882666 (+)
AKR/J	ENSMUSG00220018992	miRNA gene	Chr9:7802490-7802599 (+)
BALB/cJ	ENSMUSG00180024776	miRNA gene	Chr15:62723071-62723180 (-)
BALB/cJ	ENSMUSG00180008679	miRNA gene	Chr16:1834133-1834242 (+)
BALB/cJ	ENSMUSG00180005935	miRNA gene	Chr1:98233981-98234090 (+)
BALB/cJ	ENSMUSG00180054351	miRNA gene	Chr7:10776908-10777017 (-)
BALB/cJ	ENSMUSG00180005933	miRNA gene	Chr1:98229416-98229525 (+)
BALB/cJ	ENSMUSG00180012105	miRNA gene	Chr9:7972025-7972134 (+)
C3H/HeJ	ENSMUSG00175005671	miRNA gene	Chr1:98140015-98140124 (+)
C3H/HeJ	ENSMUSG00175004185	miRNA gene	Chr4:73124776-73124885 (+)
C3H/HeJ	ENSMUSG00175027367	miRNA gene	Chr7:105975515-105975624 (+)
C3H/HeJ	ENSMUSG00175024763	miRNA gene	Chr9:7914762-7914871 (+)
C3H/HeJ	ENSMUSG00175005477	miRNA gene	Chr15:63064200-63064309 (-)
C3H/HeJ	ENSMUSG00175005669	miRNA gene	Chr1:98135450-98135559 (+)
C3H/HeJ	ENSMUSG00175030239	miRNA gene	Chr16:2025369-2025478 (+)
C57BL/6NJ	ENSMUSG00215000410	miRNA gene	Chr1:98152453-98152562 (+)
C57BL/6NJ	ENSMUSG00215007425	miRNA gene	Chr9:7910138-7910247 (+)
C57BL/6NJ	ENSMUSG00215055078	miRNA gene	Chr7:12959598-12959707 (+)
C57BL/6NJ	ENSMUSG00215021454	miRNA gene	Chr16:1706615-1706724 (+)
C57BL/6NJ	ENSMUSG00215000409	miRNA gene	Chr1:98147891-98148000 (+)
C57BL/6NJ	ENSMUSG00215002392	miRNA gene	Chr4:73076163-73076272 (+)
C57BL/6NJ	ENSMUSG00215000678	miRNA gene	Chr3:46460594-46460703 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031473	miRNA gene	Chr16:1907926-1908035 (+)
CBA/J	ENSMUSG00210000224	miRNA gene	Chr1:97998180-97998289 (+)
CBA/J	ENSMUSG00210001382	miRNA gene	Chr4:72708633-72708742 (+)
CBA/J	ENSMUSG00210000222	miRNA gene	Chr1:97993615-97993724 (+)
CBA/J	ENSMUSG00210025220	miRNA gene	Chr7:105699017-105699126 (+)
CBA/J	ENSMUSG00210012119	miRNA gene	Chr16:2042717-2042826 (+)
CBA/J	ENSMUSG00210011094	miRNA gene	Chr9:7956902-7957011 (+)
CBA/J	ENSMUSG00210025606	miRNA gene	Chr15:62841688-62841797 (-)
DBA/2J	ENSMUSG00185000815	miRNA gene	Chr4:73256189-73256298 (+)
DBA/2J	ENSMUSG00185010352	miRNA gene	Chr16:1987869-1987978 (+)
DBA/2J	ENSMUSG00185056082	miRNA gene	Chr7:14058537-14058646 (-)
DBA/2J	ENSMUSG00185023136	miRNA gene	Chr7:110049706-110049815 (+)
DBA/2J	ENSMUSG00185005383	miRNA gene	Chr9:8039846-8039955 (+)
DBA/2J	ENSMUSG00185008920	miRNA gene	Chr1:102465609-102465718 (+)
DBA/2J	ENSMUSG00185008922	miRNA gene	Chr1:102470173-102470282 (+)
FVB/NJ	ENSMUSG00205013274	miRNA gene	Chr16:1904829-1904938 (+)
JF1/MsJ	ENSUMUG00000037252	miRNA gene	Chr16:2030549-2030658 (+)
JF1/MsJ	ENSUMUG00000058091	miRNA gene	Chr17:25819073-25819182 (-)
JF1/MsJ	ENSUMUG00000053461	miRNA gene	Chr7:115109521-115109630 (+)
JF1/MsJ	ENSUMUG00000029727	miRNA gene	Chr3:45802745-45802854 (-)
JF1/MsJ	ENSUMUG00000039409	miRNA gene	Chr7:39268544-39268653 (+)
JF1/MsJ	ENSUMUG00000021981	miRNA gene	Chr10:20822321-20822430 (+)
JF1/MsJ	ENSUMUG00000039384	miRNA gene	Chr7:39263990-39264099 (+)
JF1/MsJ	ENSUMUG00000021965	miRNA gene	Chr10:20817774-20817883 (+)
JF1/MsJ	ENSUMUG00000042864	miRNA gene	Chr13:58120672-58120781 (-)
JF1/MsJ	ENSUMUG00000026130	miRNA gene	Chr10:70666316-70666425 (+)
LP/J	ENSMUSG00230012668	miRNA gene	Chr16:4528865-4528974 (+)
LP/J	ENSMUSG00230038580	miRNA gene	Chr7:116149099-116149208 (+)
LP/J	ENSMUSG00230004928	miRNA gene	Chr9:8467789-8467898 (+)
LP/J	ENSMUSG00230000562	miRNA gene	Chr3:48329390-48329499 (-)
LP/J	ENSMUSG00230000321	miRNA gene	Chr1:101733273-101733382 (+)
LP/J	ENSMUSG00230000320	miRNA gene	Chr1:101728709-101728818 (+)
NOD/ShiLtJ	ENSMUSG00190000749	miRNA gene	Chr1:98057383-98057492 (+)
NOD/ShiLtJ	ENSMUSG00190023408	miRNA gene	Chr9:7948090-7948199 (+)
NOD/ShiLtJ	ENSMUSG00190027495	miRNA gene	Chr16:2067346-2067455 (+)
NOD/ShiLtJ	ENSMUSG00190000755	miRNA gene	Chr1:98061947-98062056 (+)
NOD/ShiLtJ	ENSMUSG00190001002	miRNA gene	Chr4:72136261-72136370 (+)
NZO/HlLtJ	ENSMUSG00225023284	miRNA gene	Chr16:7771209-7771318 (+)
NZO/HlLtJ	ENSMUSG00225028803	miRNA gene	Chr5:55205324-55205433 (+)
NZO/HlLtJ	ENSMUSG00225000534	miRNA gene	Chr1:105624720-105624829 (+)
NZO/HlLtJ	ENSMUSG00225028806	miRNA gene	Chr5:55210097-55210206 (+)
NZO/HlLtJ	ENSMUSG00225007693	miRNA gene	Chr6:133819034-133819143 (+)
NZO/HlLtJ	ENSMUSG00225054742	miRNA gene	Chr7:15519414-15519523 (-)
NZO/HlLtJ	ENSMUSG00225019115	miRNA gene	Chr3:50954377-50954486 (-)
NZO/HlLtJ	ENSMUSG00225017780	miRNA gene	Chr9:8379357-8379466 (+)
NZO/HlLtJ	ENSMUSG00225000530	miRNA gene	Chr1:105620155-105620264 (+)
NZO/HlLtJ	ENSMUSG00225054745	miRNA gene	Chr7:15595032-15595141 (-)
PWK/PhJ	ENSLUMG00010010931	miRNA gene	Chr10:20727681-20727790 (+)
PWK/PhJ	ENSLUMG00010025567	miRNA gene	Chr13:57045807-57045916 (-)
PWK/PhJ	ENSLUMG00010018167	miRNA gene	Chr16:1896702-1896811 (+)
PWK/PhJ	ENSLUMG00010013959	miRNA gene	Chr7:104245456-104245565 (+)
PWK/PhJ	ENSLUMG00010013954	miRNA gene	Chr7:104240852-104240961 (+)
PWK/PhJ	ENSLUMG00010010684	miRNA gene	Chr3:45944755-45944864 (-)
PWK/PhJ	ENSLUMG00010053149	miRNA gene	Chr2:21461499-21461608 (-)
SPRET/EiJ	ENSMSPG00010005835	miRNA gene	Chr1:144123948-144124052 (-)
SPRET/EiJ	ENSMSPG00010018803	miRNA gene	Chr16:1842553-1842662 (+)
SPRET/EiJ	ENSMSPG00010015344	miRNA gene	Chr8:15497693-15497802 (+)
SPRET/EiJ	ENSMSPG00010050600	miRNA gene	Chr7:2315296-2315400 (+)
WSB/EiJ	ENSIUOG00005000343	miRNA gene	Chr1:97704935-97705044 (+)
WSB/EiJ	ENSIUOG00005017218	miRNA gene	Chr16:2022060-2022169 (+)
WSB/EiJ	ENSIUOG00005010137	miRNA gene	Chr4:72490784-72490893 (+)
WSB/EiJ	ENSIUOG00005008039	miRNA gene	Chr9:7683140-7683249 (+)

Homology

• Gene Tree
  Gm55014
  

Sequences &
Gene Models

• All Sequences
  101

• Ensembl
  ENSMUSG00002076913 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076913	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182155	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;