Gm55013 Gene Detail

Summary

• Symbol
  Gm55013
• Name
  predicted gene, 55013

• Feature Type
  snoRNA gene
• IDs
  MGI:6846500
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:81615458-81615582 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846500	snoRNA gene	Chr7:81615458-81615582 (+)
129S1/SvImJ	ENSMUSG00200035326	snoRNA gene	Chr7:68434336-68434460 (+)
A/J	ENSMUSG00195044923	snoRNA gene	Chr7:72860623-72860747 (+)
AKR/J	ENSMUSG00220039614	snoRNA gene	Chr7:66395440-66395564 (+)
BALB/cJ	ENSMUSG00180013399	snoRNA gene	Chr7:69578522-69578646 (+)
C3H/HeJ	ENSMUSG00175022611	snoRNA gene	Chr7:70346434-70346558 (+)
C57BL/6NJ	ENSMUSG00215029927	snoRNA gene	Chr7:69443158-69443282 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045747	snoRNA gene	Chr7:72915719-72915843 (+)
CBA/J	ENSMUSG00210024005	snoRNA gene	Chr7:70197566-70197690 (+)
DBA/2J	ENSMUSG00185048893	snoRNA gene	Chr7:74520380-74520504 (+)
FVB/NJ	ENSMUSG00205027343	snoRNA gene	Chr7:70096403-70096527 (+)
JF1/MsJ	ENSUMUG00000028224	snoRNA gene	Chr7:79194663-79194787 (+)
LP/J	ENSMUSG00230016933	snoRNA gene	Chr7:80609616-80609740 (+)
NOD/ShiLtJ	ENSMUSG00190020705	snoRNA gene	Chr7:70339944-70340068 (+)
NZO/HlLtJ	ENSMUSG00225043270	snoRNA gene	Chr7:78858641-78858765 (+)
PWK/PhJ	ENSLUMG00010018045	snoRNA gene	Chr7:68801154-68801278 (+)
SPRET/EiJ	ENSMSPG00010024902	snoRNA gene	Chr7:69192612-69192736 (+)
WSB/EiJ	ENSIUOG00005035090	snoRNA gene	Chr7:70685211-70685335 (+)

Homology

• Gene Tree
  Gm55013
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076387 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076387	Ensembl Gene Model | MGI Sequence Detail	125	C57BL/6J
transcript	ENSMUST00020183354	Ensembl | MGI Sequence Detail	125	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;