Gm55011 Gene Detail

Summary

• Symbol
  Gm55011
• Name
  predicted gene, 55011

• Feature Type
  miRNA gene
• IDs
  MGI:6846496
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:15468536-15468645 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  60 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846496	miRNA gene	Chr8:15468536-15468645 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195011772	miRNA gene	Chr14:78879470-78879575 (-)
A/J	ENSMUSG00195004538	miRNA gene	Chr8:46180990-46181099 (-)
A/J	ENSMUSG00195042579	miRNA gene	Chr8:12726506-12726615 (+)
AKR/J	ENSMUSG00220032736	miRNA gene	Chr8:12431814-12431923 (+)
BALB/cJ	ENSMUSG00180025552	miRNA gene	Chr8:12341611-12341720 (+)
C3H/HeJ	ENSMUSG00175039086	miRNA gene	Chr8:12525253-12525362 (+)
C57BL/6NJ	ENSMUSG00215029423	miRNA gene	Chr8:12396255-12396364 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210044627	miRNA gene	Chr8:12359126-12359235 (+)
DBA/2J	ENSMUSG00185006776	miRNA gene	Chr8:12491822-12491931 (+)
DBA/2J	ENSMUSG00185012635	miRNA gene	Chr9:46189467-46189576 (+)
DBA/2J	ENSMUSG00185008936	miRNA gene	Chr8:51620065-51620174 (-)
DBA/2J	ENSMUSG00185017180	miRNA gene	Chr5:71326108-71326217 (+)
FVB/NJ	ENSMUSG00205037337	miRNA gene	Chr8:12382612-12382721 (+)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190041980	miRNA gene	Chr8:12489418-12489527 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55011
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076692 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076692	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182514	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;