Gm55010 Gene Detail

Summary

• Symbol
  Gm55010
• Name
  predicted gene, 55010

• Feature Type
  miRNA gene
• IDs
  MGI:6846494
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:15463980-15464089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  28

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846494	miRNA gene	Chr8:15463980-15464089 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195000331	miRNA gene	Chr4:24818481-24818590 (-)
A/J	ENSMUSG00195000741	miRNA gene	Chr2:91854867-91854976 (+)
A/J	ENSMUSG00195023588	miRNA gene	Chr2:152087705-152087814 (-)
A/J	ENSMUSG00195042632	miRNA gene	Chr8:12721950-12722059 (+)
AKR/J	ENSMUSG00220032809	miRNA gene	Chr8:12427258-12427367 (+)
BALB/cJ	ENSMUSG00180025622	miRNA gene	Chr8:12337055-12337164 (+)
C3H/HeJ	ENSMUSG00175051440	miRNA gene	Chr7:6682403-6682512 (+)
C3H/HeJ	ENSMUSG00175039156	miRNA gene	Chr8:12520697-12520806 (+)
C57BL/6NJ	ENSMUSG00215029548	miRNA gene	Chr8:12391699-12391808 (+)
C57BL/6NJ	ENSMUSG00215012328	miRNA gene	Chr8:45665848-45665957 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210044695	miRNA gene	Chr8:12354570-12354679 (+)
DBA/2J	ENSMUSG00185006791	miRNA gene	Chr8:12487266-12487375 (+)
DBA/2J	ENSMUSG00185015591	miRNA gene	Chr14:84039964-84040069 (-)
DBA/2J	ENSMUSG00185049833	miRNA gene	Chr7:9484125-9484234 (+)
DBA/2J	ENSMUSG00185028063	miRNA gene	Chr11:118115658-118115767 (-)
DBA/2J	ENSMUSG00185050147	miRNA gene	Chr2:151929604-151929713 (-)
DBA/2J	ENSMUSG00185005779	miRNA gene	Chr2:91758424-91758533 (+)
FVB/NJ	ENSMUSG00205044382	miRNA gene	Chr6:64880689-64880799 (+)
FVB/NJ	ENSMUSG00205037444	miRNA gene	Chr8:12378056-12378165 (+)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190050804	miRNA gene	Chr11:118186878-118186987 (-)
NOD/ShiLtJ	ENSMUSG00190042093	miRNA gene	Chr8:12484862-12484971 (+)
NOD/ShiLtJ	ENSMUSG00190040851	miRNA gene	Chr13:58325391-58325500 (-)
NOD/ShiLtJ	ENSMUSG00190040890	miRNA gene	Chr13:58330171-58330280 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021263	miRNA gene	Chr8:12370658-12370767 (+)
WSB/EiJ	ENSIUOG00005001143	miRNA gene	Chr1:111426244-111426353 (-)
WSB/EiJ	ENSIUOG00005053539	miRNA gene	Chr2:91550287-91550396 (+)
WSB/EiJ	ENSIUOG00005027787	miRNA gene	Chr13:57768311-57768420 (-)

Homology

• Gene Tree
  Gm55010
  

Sequences &
Gene Models

• All Sequences
  30

• Ensembl
  ENSMUSG00002076067 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076067	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020181960	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;