Gm55008 Gene Detail

Summary

• Symbol
  Gm55008
• Name
  predicted gene, 55008

• Feature Type
  miRNA gene
• IDs
  MGI:6846490
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:89751129-89751198 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846490	miRNA gene	Chr18:89751129-89751198 (+)
129S1/SvImJ	ENSMUSG00200015519	miRNA gene	Chr18:87073586-87073655 (+)
A/J	ENSMUSG00195001363	miRNA gene	Chr18:87025686-87025755 (+)
AKR/J	ENSMUSG00220016751	miRNA gene	Chr18:86952714-86952783 (+)
BALB/cJ	ENSMUSG00180002714	miRNA gene	Chr18:87627046-87627115 (+)
C3H/HeJ	ENSMUSG00175019005	miRNA gene	Chr18:87139427-87139496 (+)
C57BL/6NJ	ENSMUSG00215004295	miRNA gene	Chr18:86609470-86609539 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005527	miRNA gene	Chr18:86034148-86034217 (-)
CBA/J	ENSMUSG00210018187	miRNA gene	Chr18:87090061-87090130 (+)
DBA/2J	ENSMUSG00185004364	miRNA gene	Chr18:86977274-86977343 (+)
FVB/NJ	ENSMUSG00205014500	miRNA gene	Chr18:86412011-86412080 (+)
JF1/MsJ	ENSUMUG00000018721	miRNA gene	Chr18:86859321-86859390 (+)
LP/J	ENSMUSG00230017780	miRNA gene	Chr18:89136664-89136733 (+)
NOD/ShiLtJ	ENSMUSG00190003508	miRNA gene	Chr18:86796631-86796700 (+)
NZO/HlLtJ	ENSMUSG00225023516	miRNA gene	Chr18:88996929-88996998 (+)
PWK/PhJ	ENSLUMG00010004132	miRNA gene	Chr18:87299233-87299302 (+)
SPRET/EiJ	ENSMSPG00010001346	miRNA gene	Chr18:87811368-87811411 (+)
WSB/EiJ	ENSIUOG00005016475	miRNA gene	Chr18:86506653-86506722 (+)

Homology

• Gene Tree
  Gm55008
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075318 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075318	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020183548	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;