Gm55005 Gene Detail

Summary

• Symbol
  Gm55005
• Name
  predicted gene, 55005

• Feature Type
  snRNA gene
• IDs
  MGI:6846485
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:63235670-63235770 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846485	snRNA gene	Chr7:63235670-63235770 (+)
129S1/SvImJ	ENSMUSG00200009032	snRNA gene	Chr7:50001056-50001156 (+)
A/J	ENSMUSG00195013547	snRNA gene	Chr7:54391404-54391504 (+)
AKR/J	ENSMUSG00220011625	snRNA gene	Chr7:47926867-47926967 (+)
BALB/cJ	ENSMUSG00180005194	snRNA gene	Chr7:51123726-51123826 (+)
C3H/HeJ	ENSMUSG00175011106	snRNA gene	Chr7:51871517-51871617 (+)
C57BL/6NJ	ENSMUSG00215026728	snRNA gene	Chr7:51029263-51029363 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012258	snRNA gene	Chr7:54608735-54608835 (+)
CBA/J	ENSMUSG00210020163	snRNA gene	Chr7:51767701-51767801 (+)
DBA/2J	ENSMUSG00185006775	snRNA gene	Chr7:56102100-56102200 (+)
FVB/NJ	ENSMUSG00205005155	snRNA gene	Chr7:51691526-51691626 (+)
JF1/MsJ	ENSUMUG00000010496	snRNA gene	Chr7:60847896-60847996 (+)
LP/J	ENSMUSG00230021067	snRNA gene	Chr7:62103611-62103711 (+)
NOD/ShiLtJ	ENSMUSG00190007417	snRNA gene	Chr7:51876449-51876549 (+)
NZO/HlLtJ	ENSMUSG00225010664	snRNA gene	Chr7:60414998-60415098 (+)
PWK/PhJ	ENSLUMG00010002516	snRNA gene	Chr7:50394687-50394787 (+)
SPRET/EiJ	ENSMSPG00010003863	snRNA gene	Chr7:50763885-50763985 (+)
WSB/EiJ	ENSIUOG00005005845	snRNA gene	Chr7:52296259-52296359 (+)

Homology

• Gene Tree
  Gm55005
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  3
• Endonuclease-mediated
  1
• Targeted
  2
• Genomic Mutations
  3 involving Gm55005
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074869 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074869	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020183758	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:94077 Mutant Mouse Regional Resource Centers, Information obtained from the Mutant Mouse Regional Resource Centers (MMRRC). Unpublished. 2004-2015;
• Latest
  J:238766 Shanghai Model Organisms Center, Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China. MGI Direct Data Submission. 2017;