Gm55004 Gene Detail

Summary

• Symbol
  Gm55004
• Name
  predicted gene, 55004

• Feature Type
  snRNA gene
• IDs
  MGI:6846483
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:53946798-53946859 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846483	snRNA gene	Chr8:53946798-53946859 (+)
129S1/SvImJ	ENSMUSG00200006886	snRNA gene	Chr8:49043960-49044021 (+)
A/J	ENSMUSG00195004100	snRNA gene	Chr8:49545512-49545573 (+)
AKR/J	ENSMUSG00220004593	snRNA gene	Chr8:49360230-49360291 (+)
BALB/cJ	ENSMUSG00180002969	snRNA gene	Chr8:49113470-49113531 (+)
C3H/HeJ	ENSMUSG00175005349	snRNA gene	Chr8:49257138-49257199 (+)
C57BL/6NJ	ENSMUSG00215011101	snRNA gene	Chr8:49038194-49038255 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020317	snRNA gene	Chr8:48955877-48955938 (+)
CBA/J	ENSMUSG00210019046	snRNA gene	Chr8:49092987-49093048 (+)
DBA/2J	ENSMUSG00185008824	snRNA gene	Chr8:54992257-54992318 (+)
FVB/NJ	ENSMUSG00205002919	snRNA gene	Chr8:48258972-48259033 (+)
JF1/MsJ	ENSUMUG00000005848	snRNA gene	Chr8:56595467-56595528 (+)
LP/J	ENSMUSG00230017604	snRNA gene	Chr8:58653730-58653791 (+)
NOD/ShiLtJ	ENSMUSG00190006577	snRNA gene	Chr8:49149339-49149400 (+)
NZO/HlLtJ	ENSMUSG00225030829	snRNA gene	Chr8:62226493-62226554 (+)
PWK/PhJ	ENSLUMG00010009923	snRNA gene	Chr8:48874848-48874909 (+)
SPRET/EiJ	ENSMSPG00010006200	snRNA gene	Chr8:49823812-49823873 (+)
WSB/EiJ	ENSIUOG00005002613	snRNA gene	Chr8:49956268-49956329 (+)

Homology

• Gene Tree
  Gm55004
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118776 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118776	Ensembl Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	ENSMUST00000185195	Ensembl | MGI Sequence Detail	62	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;