Gm55003 Gene Detail

Summary

• Symbol
  Gm55003
• Name
  predicted gene, 55003

• Feature Type
  miRNA gene
• IDs
  MGI:6846481
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:52494459-52494603 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846481	miRNA gene	Chr8:52494459-52494603 (-)
129S1/SvImJ	ENSMUSG00200006432	miRNA gene	Chr8:47625239-47625383 (-)
A/J	ENSMUSG00195004188	miRNA gene	Chr8:48121320-48121464 (-)
AKR/J	ENSMUSG00220004560	miRNA gene	Chr8:47909070-47909214 (-)
BALB/cJ	ENSMUSG00180003027	miRNA gene	Chr8:47661309-47661453 (-)
C3H/HeJ	ENSMUSG00175005426	miRNA gene	Chr8:47776167-47776311 (-)
C57BL/6NJ	ENSMUSG00215011225	miRNA gene	Chr8:47586025-47586169 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020213	miRNA gene	Chr8:47874880-47875023 (+)
CBA/J	ENSMUSG00210019359	miRNA gene	Chr8:47633154-47633298 (-)
DBA/2J	ENSMUSG00185008819	miRNA gene	Chr8:53540133-53540277 (-)
FVB/NJ	ENSMUSG00205002959	miRNA gene	Chr8:46821862-46822006 (-)
JF1/MsJ	ENSUMUG00000005565	miRNA gene	Chr8:55125073-55125217 (-)
LP/J	ENSMUSG00230017897	miRNA gene	Chr8:57201676-57201820 (-)
NOD/ShiLtJ	ENSMUSG00190006245	miRNA gene	Chr8:47694353-47694497 (-)
NZO/HlLtJ	ENSMUSG00225030899	miRNA gene	Chr8:60802436-60802580 (-)
PWK/PhJ	ENSLUMG00010009679	miRNA gene	Chr8:47543836-47543980 (+)
SPRET/EiJ	ENSMSPG00010006367	miRNA gene	Chr8:48326292-48326436 (-)
WSB/EiJ	ENSIUOG00005002637	miRNA gene	Chr8:48507100-48507244 (-)

Homology

• Gene Tree
  Gm55003
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075300 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075300	Ensembl Gene Model | MGI Sequence Detail	145	C57BL/6J
transcript	ENSMUST00020182621	Ensembl | MGI Sequence Detail	145	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;