Gm54999 Gene Detail

Summary

• Symbol
  Gm54999
• Name
  predicted gene, 54999

• Feature Type
  miRNA gene
• IDs
  MGI:6846473
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:105831983-105832052 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846473	miRNA gene	Chr12:105831983-105832052 (-)
129S1/SvImJ	ENSMUSG00200029860	miRNA gene	Chr12:97601976-97602045 (-)
A/J	ENSMUSG00195022767	miRNA gene	Chr12:100164034-100164103 (-)
AKR/J	ENSMUSG00220040995	miRNA gene	Chr12:98041516-98041585 (-)
BALB/cJ	ENSMUSG00180038531	miRNA gene	Chr12:99352203-99352272 (-)
C3H/HeJ	ENSMUSG00175035204	miRNA gene	Chr12:101981374-101981443 (-)
C57BL/6NJ	ENSMUSG00215041298	miRNA gene	Chr12:98637923-98637992 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022377	miRNA gene	Chr12:98087387-98087456 (-)
CBA/J	ENSMUSG00210014959	miRNA gene	Chr12:99043388-99043457 (-)
DBA/2J	ENSMUSG00185035680	miRNA gene	Chr12:100809034-100809103 (-)
FVB/NJ	ENSMUSG00205019278	miRNA gene	Chr12:98037660-98037729 (-)
JF1/MsJ	ENSUMUG00000026271	miRNA gene	Chr12:105573230-105573299 (-)
LP/J	ENSMUSG00230032550	miRNA gene	Chr12:107867253-107867322 (-)
NOD/ShiLtJ	ENSMUSG00190036516	miRNA gene	Chr12:87171893-87171962 (+)
NZO/HlLtJ	ENSMUSG00225038564	miRNA gene	Chr12:109607231-109607300 (-)
PWK/PhJ	ENSLUMG00010014397	miRNA gene	Chr12:99044374-99044443 (-)
SPRET/EiJ	ENSMSPG00010020927	miRNA gene	Chr12:101339868-101339934 (-)
WSB/EiJ	ENSIUOG00005010068	miRNA gene	Chr12:98045447-98045516 (-)

Homology

• Gene Tree
  Gm54999
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076716 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076716	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020181911	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;