Gm54993 Gene Detail

Summary

• Symbol
  Gm54993
• Name
  predicted gene, 54993

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846461
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:84840127-84840429 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846461	unclassified non-coding RNA gene	Chr18:84840127-84840429 (+)
129S1/SvImJ	ENSMUSG00200015397	unclassified non-coding RNA gene	Chr18:82073172-82073470 (+)
A/J	ENSMUSG00195001350	unclassified non-coding RNA gene	Chr18:82151853-82152155 (+)
AKR/J	ENSMUSG00220016837	unclassified non-coding RNA gene	Chr18:82067560-82067862 (+)
BALB/cJ	ENSMUSG00180002602	unclassified non-coding RNA gene	Chr18:82718591-82718893 (+)
C3H/HeJ	ENSMUSG00175018762	unclassified non-coding RNA gene	Chr18:82265216-82265518 (+)
C57BL/6NJ	ENSMUSG00215004308	unclassified non-coding RNA gene	Chr18:81635451-81635753 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005510	unclassified non-coding RNA gene	Chr18:81210819-81211127 (+)
CBA/J	ENSMUSG00210018039	unclassified non-coding RNA gene	Chr18:82211838-82212140 (+)
DBA/2J	ENSMUSG00185004274	unclassified non-coding RNA gene	Chr18:82114337-82114639 (+)
FVB/NJ	ENSMUSG00205014436	unclassified non-coding RNA gene	Chr18:81518801-81519103 (+)
JF1/MsJ	ENSUMUG00000018385	unclassified non-coding RNA gene	Chr18:81971416-81971714 (+)
LP/J	ENSMUSG00230018522	unclassified non-coding RNA gene	Chr18:84161990-84162288 (+)
NOD/ShiLtJ	ENSMUSG00190003520	unclassified non-coding RNA gene	Chr18:81937478-81937776 (+)
NZO/HlLtJ	ENSMUSG00225023706	unclassified non-coding RNA gene	Chr18:84052417-84052715 (+)
PWK/PhJ	ENSLUMG00010004121	unclassified non-coding RNA gene	Chr18:82386546-82386844 (+)
SPRET/EiJ	ENSMSPG00010001325	unclassified non-coding RNA gene	Chr18:82752746-82753044 (+)
WSB/EiJ	ENSIUOG00005016396	unclassified non-coding RNA gene	Chr18:81559347-81559645 (+)

Homology

• Gene Tree
  Gm54993
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075287 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075287	Ensembl Gene Model | MGI Sequence Detail	303	C57BL/6J
transcript	ENSMUST00020182048	Ensembl | MGI Sequence Detail	303	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;