Gm54988 Gene Detail

Summary

• Symbol
  Gm54988
• Name
  predicted gene, 54988

• Feature Type
  miRNA gene
• IDs
  MGI:6846451
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:96153142-96153279 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  61 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846451	miRNA gene	Chr3:96153142-96153279 (-)
129S1/SvImJ	ENSMUSG00200046366	miRNA gene	Chr3:92821216-92821353 (-)
A/J	ENSMUSG00195050715	miRNA gene	Chr3:93149525-93149662 (-)
AKR/J	ENSMUSG00220043329	miRNA gene	Chr3:91532374-91532511 (-)
BALB/cJ	ENSMUSG00180045376	miRNA gene	Chr3:93141163-93141300 (-)
C3H/HeJ	ENSMUSG00175034890	miRNA gene	Chr3:92779147-92779284 (-)
C57BL/6NJ	ENSMUSG00215039103	miRNA gene	Chr3:93508298-93508435 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020146	miRNA gene	Chr3:93335871-93336008 (-)
CBA/J	ENSMUSG00210051900	miRNA gene	Chr3:93330877-93331014 (-)
DBA/2J	ENSMUSG00185044683	miRNA gene	Chr3:93749333-93749470 (-)
FVB/NJ	ENSMUSG00205049601	miRNA gene	Chr3:92431763-92431900 (-)
JF1/MsJ	ENSUMUG00000053089	miRNA gene	Chr3:92625077-92625214 (-)
LP/J	ENSMUSG00230046016	miRNA gene	Chr3:95684587-95684724 (-)
NOD/ShiLtJ	ENSMUSG00190046697	miRNA gene	Chr3:93850750-93850887 (-)
NZO/HlLtJ	ENSMUSG00225012312	miRNA gene	Chr3:98103298-98103435 (-)
PWK/PhJ	ENSLUMG00010032536	miRNA gene	Chr3:92606723-92606860 (-)
SPRET/EiJ	ENSMSPG00010045692	miRNA gene	Chr3:92909598-92909735 (-)
WSB/EiJ	ENSIUOG00005034029	miRNA gene	Chr3:93251558-93251695 (-)

Homology

• Gene Tree
  Gm54988
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076967 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076967	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020182038	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;