Gm54987 Gene Detail

Summary

• Symbol
  Gm54987
• Name
  predicted gene, 54987

• Feature Type
  miRNA gene
• IDs
  MGI:6846449
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:96147184-96147321 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846449	miRNA gene	Chr3:96147184-96147321 (+)
129S1/SvImJ	ENSMUSG00200046557	miRNA gene	Chr3:92815252-92815389 (+)
A/J	ENSMUSG00195048539	miRNA gene	Chr3:93143563-93143700 (+)
AKR/J	ENSMUSG00220042612	miRNA gene	Chr3:91526416-91526553 (+)
BALB/cJ	ENSMUSG00180044836	miRNA gene	Chr3:93135204-93135341 (+)
C3H/HeJ	ENSMUSG00175033191	miRNA gene	Chr3:92773185-92773322 (+)
C57BL/6NJ	ENSMUSG00215037072	miRNA gene	Chr3:93502340-93502477 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020929	miRNA gene	Chr3:93329907-93330044 (+)
CBA/J	ENSMUSG00210051693	miRNA gene	Chr3:93324915-93325052 (+)
DBA/2J	ENSMUSG00185047878	miRNA gene	Chr3:93743375-93743512 (+)
FVB/NJ	ENSMUSG00205051665	miRNA gene	Chr3:92425802-92425939 (+)
JF1/MsJ	ENSUMUG00000047413	miRNA gene	Chr3:92619100-92619237 (+)
LP/J	ENSMUSG00230045995	miRNA gene	Chr3:95678623-95678760 (+)
NOD/ShiLtJ	ENSMUSG00190046729	miRNA gene	Chr3:93844755-93844892 (+)
NZO/HlLtJ	ENSMUSG00225012308	miRNA gene	Chr3:98097340-98097477 (+)
PWK/PhJ	ENSLUMG00010029577	miRNA gene	Chr3:92600741-92600878 (+)
SPRET/EiJ	ENSMSPG00010047405	miRNA gene	Chr3:92903636-92903773 (+)
WSB/EiJ	ENSIUOG00005032262	miRNA gene	Chr3:93245597-93245734 (+)

Homology

• Gene Tree
  Gm54987
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076697 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076697	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020181968	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;