Gm54986 Gene Detail

Summary

• Symbol
  Gm54986
• Name
  predicted gene, 54986

• Feature Type
  snRNA gene
• IDs
  MGI:6846447
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:98314116-98314206 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846447	snRNA gene	Chr11:98314116-98314206 (-)
129S1/SvImJ	ENSMUSG00200053026	snRNA gene	Chr11:95569147-95569237 (-)
A/J	ENSMUSG00195052887	snRNA gene	Chr11:95284210-95284300 (-)
AKR/J	ENSMUSG00220052638	snRNA gene	Chr11:95543343-95543433 (-)
BALB/cJ	ENSMUSG00180052766	snRNA gene	Chr11:95556008-95556098 (-)
C3H/HeJ	ENSMUSG00175052488	snRNA gene	Chr11:95542755-95542845 (-)
C57BL/6NJ	ENSMUSG00215054271	snRNA gene	Chr11:95132287-95132377 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051899	snRNA gene	Chr11:94995216-94995306 (-)
CBA/J	ENSMUSG00210053782	snRNA gene	Chr11:95246237-95246327 (-)
DBA/2J	ENSMUSG00185051982	snRNA gene	Chr11:95592669-95592759 (-)
FVB/NJ	ENSMUSG00205051368	snRNA gene	Chr11:95459569-95459659 (-)
JF1/MsJ	ENSUMUG00000056229	snRNA gene	Chr11:95898558-95898648 (-)
LP/J	ENSMUSG00230051222	snRNA gene	Chr11:96645563-96645653 (-)
NOD/ShiLtJ	ENSMUSG00190052606	snRNA gene	Chr11:95633946-95634036 (-)
NZO/HlLtJ	ENSMUSG00225052979	snRNA gene	Chr11:98698547-98698637 (-)
PWK/PhJ	ENSLUMG00010052718	snRNA gene	Chr11:95450113-95450203 (-)
SPRET/EiJ	ENSMSPG00010051460	snRNA gene	Chr11:95942851-95942941 (-)
WSB/EiJ	ENSIUOG00005051406	snRNA gene	Chr11:95399224-95399314 (-)

Homology

• Gene Tree
  Gm54986
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076412 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076412	Ensembl Gene Model | MGI Sequence Detail	91	C57BL/6J
transcript	ENSMUST00020183773	Ensembl | MGI Sequence Detail	91	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;