Gm54985 Gene Detail

Summary

• Symbol
  Gm54985
• Name
  predicted gene, 54985

• Feature Type
  miRNA gene
• IDs
  MGI:6846445
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:96127817-96127957 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846445	miRNA gene	Chr3:96127817-96127957 (+)
129S1/SvImJ	ENSMUSG00200046552	miRNA gene	Chr3:92795938-92796078 (+)
A/J	ENSMUSG00195048524	miRNA gene	Chr3:93124248-93124388 (+)
AKR/J	ENSMUSG00220042599	miRNA gene	Chr3:91507053-91507193 (+)
BALB/cJ	ENSMUSG00180044823	miRNA gene	Chr3:93115835-93115975 (+)
C3H/HeJ	ENSMUSG00175033171	miRNA gene	Chr3:92753871-92754011 (+)
C57BL/6NJ	ENSMUSG00215037019	miRNA gene	Chr3:93482972-93483112 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020917	miRNA gene	Chr3:93310595-93310735 (+)
CBA/J	ENSMUSG00210051691	miRNA gene	Chr3:93305599-93305739 (+)
DBA/2J	ENSMUSG00185047862	miRNA gene	Chr3:93724012-93724152 (+)
FVB/NJ	ENSMUSG00205051661	miRNA gene	Chr3:92406487-92406627 (+)
JF1/MsJ	ENSUMUG00000025723	miRNA gene	Chr13:19058995-19059135 (-)
JF1/MsJ	ENSUMUG00000047439	miRNA gene	Chr3:92599705-92599845 (+)
LP/J	ENSMUSG00230022162	miRNA gene	Chr13:30640454-30640594 (-)
LP/J	ENSMUSG00230045985	miRNA gene	Chr3:95659309-95659449 (+)
NOD/ShiLtJ	ENSMUSG00190046709	miRNA gene	Chr3:93826014-93826154 (+)
NZO/HlLtJ	ENSMUSG00225012305	miRNA gene	Chr3:98077973-98078113 (+)
PWK/PhJ	ENSLUMG00010029594	miRNA gene	Chr3:92579346-92579486 (+)
SPRET/EiJ	ENSMSPG00010047395	miRNA gene	Chr3:92884386-92884526 (+)
WSB/EiJ	ENSIUOG00005032248	miRNA gene	Chr3:93226272-93226412 (+)

Homology

• Gene Tree
  Gm54985
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00002075180 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075180	Ensembl Gene Model | MGI Sequence Detail	141	C57BL/6J
transcript	ENSMUST00020182582	Ensembl | MGI Sequence Detail	141	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;