Gm54982 Gene Detail

Summary

• Symbol
  Gm54982
• Name
  predicted gene, 54982

• Feature Type
  miRNA gene
• IDs
  MGI:6846439
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:7938685-7938793 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846439	miRNA gene	Chr5:7938685-7938793 (+)
129S1/SvImJ	ENSMUSG00200002704	miRNA gene	Chr5:4637849-4637959 (+)
A/J	ENSMUSG00195012556	miRNA gene	Chr5:4642393-4642501 (+)
AKR/J	ENSMUSG00220002044	miRNA gene	Chr5:4550121-4550231 (+)
BALB/cJ	ENSMUSG00180018660	miRNA gene	Chr5:4407347-4407457 (+)
C3H/HeJ	ENSMUSG00175029783	miRNA gene	Chr5:4573265-4573373 (+)
C57BL/6NJ	ENSMUSG00215028664	miRNA gene	Chr5:4854874-4854982 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001960	miRNA gene	Chr5:4747931-4748043 (+)
CBA/J	ENSMUSG00210002976	miRNA gene	Chr5:4943806-4943914 (+)
DBA/2J	ENSMUSG00185029121	miRNA gene	Chr5:4941698-4941806 (+)
FVB/NJ	ENSMUSG00205008778	miRNA gene	Chr5:4664844-4664954 (+)
JF1/MsJ	ENSUMUG00000004553	miRNA gene	Chr5:4981433-4981559 (+)
LP/J	ENSMUSG00230003564	miRNA gene	Chr5:8885487-8885597 (+)
NOD/ShiLtJ	ENSMUSG00190013736	miRNA gene	Chr5:4459236-4459380 (+)
NZO/HlLtJ	ENSMUSG00225008831	miRNA gene	Chr5:12620836-12620946 (+)
PWK/PhJ	ENSLUMG00010020098	miRNA gene	Chr5:4899174-4899296 (+)
SPRET/EiJ	ENSMSPG00010005316	miRNA gene	Chr5:4789362-4789494 (+)
WSB/EiJ	ENSIUOG00005027619	miRNA gene	Chr5:4653704-4653814 (+)

Homology

• Gene Tree
  Gm54982
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076164 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076164	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182859	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;