Gm54981 Gene Detail

Summary

• Symbol
  Gm54981
• Name
  predicted gene, 54981

• Feature Type
  miRNA gene
• IDs
  MGI:6846437
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:104445054-104445163 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  53

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846437	miRNA gene	Chr5:104445054-104445163 (+)
129S1/SvImJ	ENSMUSG00200048813	miRNA gene	Chr6:126227003-126227112 (+)
129S1/SvImJ	ENSMUSG00200006567	miRNA gene	Chr5:98164976-98165085 (+)
A/J	ENSMUSG00195035056	miRNA gene	Chr5:97771872-97771981 (+)
A/J	ENSMUSG00195035404	miRNA gene	Chr6:125641577-125641686 (+)
AKR/J	ENSMUSG00220044053	miRNA gene	Chr6:124503210-124503319 (+)
AKR/J	ENSMUSG00220052745	miRNA gene	Chr3:89394360-89394469 (+)
AKR/J	ENSMUSG00220038615	miRNA gene	Chr5:97233592-97233701 (+)
BALB/cJ	ENSMUSG00180037771	miRNA gene	Chr5:97924010-97924119 (+)
C3H/HeJ	ENSMUSG00175033530	miRNA gene	Chr5:99990423-99990532 (+)
C3H/HeJ	ENSMUSG00175045065	miRNA gene	Chr6:125658773-125658882 (+)
C57BL/6NJ	ENSMUSG00215024493	miRNA gene	Chr5:97835751-97835860 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024114	miRNA gene	Chr5:97123367-97123476 (+)
CBA/J	ENSMUSG00210017355	miRNA gene	Chr6:125678602-125678711 (+)
CBA/J	ENSMUSG00210034117	miRNA gene	Chr5:98740748-98740857 (+)
DBA/2J	ENSMUSG00185047599	miRNA gene	Chr5:101662801-101662910 (+)
FVB/NJ	ENSMUSG00205041118	miRNA gene	Chr5:97656458-97656567 (+)
JF1/MsJ	ENSUMUG00000025885	miRNA gene	Chr1:84969870-84969979 (+)
JF1/MsJ	ENSUMUG00000041668	miRNA gene	Chr13:30303698-30303807 (-)
JF1/MsJ	ENSUMUG00000038247	miRNA gene	Chr14:42834663-42834772 (+)
JF1/MsJ	ENSUMUG00000042019	miRNA gene	Chr17:4456107-4456216 (-)
JF1/MsJ	ENSUMUG00000029004	miRNA gene	Chr4:116377280-116377389 (+)
JF1/MsJ	ENSUMUG00000018342	miRNA gene	Chr5:104598717-104598826 (+)
JF1/MsJ	ENSUMUG00000002955	miRNA gene	Chr1:43682155-43682264 (-)
JF1/MsJ	ENSUMUG00000025396	miRNA gene	Chr1:83110716-83110825 (-)
JF1/MsJ	ENSUMUG00000025870	miRNA gene	Chr1:84928966-84929075 (-)
JF1/MsJ	ENSUMUG00000029034	miRNA gene	Chr4:116381843-116381952 (+)
LP/J	ENSMUSG00230046085	miRNA gene	Chr6:127576019-127576128 (+)
LP/J	ENSMUSG00230031873	miRNA gene	Chr5:105706325-105706434 (+)
NOD/ShiLtJ	ENSMUSG00190026557	miRNA gene	Chr5:97650499-97650608 (+)
NZO/HlLtJ	ENSMUSG00225026305	miRNA gene	Chr5:113474544-113474653 (+)
PWK/PhJ	ENSLUMG00010001732	miRNA gene	Chr4:71630679-71630788 (-)
PWK/PhJ	ENSLUMG00010015972	miRNA gene	Chr5:96715939-96716048 (+)
PWK/PhJ	ENSLUMG00010052303	miRNA gene	Chr7:5031320-5031429 (-)
PWK/PhJ	ENSLUMG00010010089	miRNA gene	Chr3:119100221-119100330 (+)
PWK/PhJ	ENSLUMG00010049635	miRNA gene	Chr7:124945179-124945288 (+)
PWK/PhJ	ENSLUMG00010010306	miRNA gene	Chr8:45496184-45496293 (-)
PWK/PhJ	ENSLUMG00010046248	miRNA gene	Chr2:38661329-38661433 (+)
PWK/PhJ	ENSLUMG00010012229	miRNA gene	Chr13:85001214-85001323 (+)
PWK/PhJ	ENSLUMG00010041986	miRNA gene	Chr2:139811412-139811521 (-)
SPRET/EiJ	ENSMSPG00010002791	miRNA gene	Chr14:5135741-5135850 (-)
SPRET/EiJ	ENSMSPG00010043120	miRNA gene	Chr8:103530788-103530897 (-)
SPRET/EiJ	ENSMSPG00010043145	miRNA gene	Chr8:108284534-108284643 (+)
SPRET/EiJ	ENSMSPG00010004779	miRNA gene	ChrX:45326640-45326749 (-)
SPRET/EiJ	ENSMSPG00010039010	miRNA gene	Chr3:108320741-108320850 (-)
SPRET/EiJ	ENSMSPG00010025856	miRNA gene	Chr5:99652127-99652236 (+)
SPRET/EiJ	ENSMSPG00010020034	miRNA gene	Chr19:10079761-10079870 (+)
SPRET/EiJ	ENSMSPG00010015288	miRNA gene	Chr6:109931422-109931531 (-)
SPRET/EiJ	ENSMSPG00010013525	miRNA gene	Chr7:88551322-88551431 (-)
WSB/EiJ	ENSIUOG00005011022	miRNA gene	Chr17:73232128-73232237 (+)
WSB/EiJ	ENSIUOG00005033578	miRNA gene	Chr5:100338719-100338828 (+)
WSB/EiJ	ENSIUOG00005051153	miRNA gene	Chr3:90747680-90747789 (+)
WSB/EiJ	ENSIUOG00005011147	miRNA gene	Chr7:86972680-86972789 (+)

Homology

• Gene Tree
  Gm54981
  

Sequences &
Gene Models

• All Sequences
  55

• Ensembl
  ENSMUSG00002076521 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076521	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182427	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;