Gm54979 Gene Detail

Summary

• Symbol
  Gm54979
• Name
  predicted gene, 54979

• Feature Type
  snRNA gene
• IDs
  MGI:6846433
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:90286772-90286866 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846433	snRNA gene	Chr10:90286772-90286866 (+)
129S1/SvImJ	ENSMUSG00200032137	snRNA gene	Chr10:86784918-86785012 (+)
A/J	ENSMUSG00195022744	snRNA gene	Chr10:87221062-87221156 (+)
AKR/J	ENSMUSG00220022929	snRNA gene	Chr10:86779636-86779730 (+)
BALB/cJ	ENSMUSG00180035861	snRNA gene	Chr10:87223925-87224019 (+)
C3H/HeJ	ENSMUSG00175023976	snRNA gene	Chr10:87121818-87121912 (+)
C57BL/6NJ	ENSMUSG00215033852	snRNA gene	Chr10:86798139-86798233 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038242	snRNA gene	Chr10:86499838-86499931 (+)
CBA/J	ENSMUSG00210039041	snRNA gene	Chr10:86962275-86962369 (+)
DBA/2J	ENSMUSG00185044393	snRNA gene	Chr10:87189479-87189573 (+)
FVB/NJ	ENSMUSG00205023437	snRNA gene	Chr10:86849813-86849907 (+)
JF1/MsJ	ENSUMUG00000030895	snRNA gene	Chr10:88548220-88548313 (+)
LP/J	ENSMUSG00230019376	snRNA gene	Chr10:89068533-89068627 (+)
NOD/ShiLtJ	ENSMUSG00190019595	snRNA gene	Chr10:87205945-87206039 (+)
NZO/HlLtJ	ENSMUSG00225022413	snRNA gene	Chr10:93329337-93329431 (+)
PWK/PhJ	ENSLUMG00010024962	snRNA gene	Chr10:86837510-86837603 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005039738	snRNA gene	Chr10:86914734-86914827 (+)

Homology

• Gene Tree
  Gm54979
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075767 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075767	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020183610	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;