Gm54976 Gene Detail

Summary

• Symbol
  Gm54976
• Name
  predicted gene, 54976

• Feature Type
  miRNA gene
• IDs
  MGI:6846427
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:58900021-58900089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846427	miRNA gene	ChrX:58900021-58900089 (+)
129S1/SvImJ	ENSMUSG00200016251	miRNA gene	ChrX:41150578-41150646 (+)
A/J	ENSMUSG00195009874	miRNA gene	ChrX:44679033-44679101 (+)
AKR/J	ENSMUSG00220041093	miRNA gene	ChrX:32714580-32714648 (-)
BALB/cJ	ENSMUSG00180006996	miRNA gene	ChrX:41299792-41299860 (+)
C3H/HeJ	ENSMUSG00175009220	miRNA gene	ChrX:44856223-44856291 (+)
C57BL/6NJ	ENSMUSG00215008256	miRNA gene	ChrX:41456937-41457005 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019754	miRNA gene	ChrX:43051149-43051184 (+)
CBA/J	ENSMUSG00210018844	miRNA gene	ChrX:41659083-41659151 (+)
DBA/2J	ENSMUSG00185035993	miRNA gene	ChrX:53945028-53945096 (+)
FVB/NJ	ENSMUSG00205009066	miRNA gene	ChrX:41283001-41283069 (+)
JF1/MsJ	ENSUMUG00000027356	miRNA gene	ChrX:74828179-74828222 (+)
LP/J	ENSMUSG00230030303	miRNA gene	ChrX:60501912-60501980 (+)
NOD/ShiLtJ	ENSMUSG00190013035	miRNA gene	ChrX:40949848-40949916 (+)
NZO/HlLtJ	ENSMUSG00225032612	miRNA gene	ChrX:65747395-65747463 (+)
PWK/PhJ	ENSLUMG00010026156	miRNA gene	ChrX:40764408-40764451 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005012072	miRNA gene	ChrX:41980006-41980021 (+)

Homology

• Gene Tree
  Gm54976
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076133 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076133	Ensembl Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	ENSMUST00020183257	Ensembl | MGI Sequence Detail	69	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;