Gm54975 Gene Detail

Summary

• Symbol
  Gm54975
• Name
  predicted gene, 54975

• Feature Type
  miRNA gene
• IDs
  MGI:6846425
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:58738810-58738909 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846425	miRNA gene	ChrX:58738810-58738909 (-)
129S1/SvImJ	ENSMUSG00200016248	miRNA gene	ChrX:40989590-40989689 (-)
A/J	ENSMUSG00195009866	miRNA gene	ChrX:44511606-44511705 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180006999	miRNA gene	ChrX:41138199-41138295 (-)
C3H/HeJ	ENSMUSG00175009225	miRNA gene	ChrX:44688622-44688718 (-)
C57BL/6NJ	ENSMUSG00215008244	miRNA gene	ChrX:41290531-41290630 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019748	miRNA gene	ChrX:42898166-42898251 (-)
CBA/J	ENSMUSG00210018838	miRNA gene	ChrX:41497506-41497605 (-)
DBA/2J	ENSMUSG00185035972	miRNA gene	ChrX:53783457-53783556 (-)
FVB/NJ	ENSMUSG00205009060	miRNA gene	ChrX:41123379-41123478 (-)
JF1/MsJ	ENSUMUG00000027321	miRNA gene	ChrX:74672483-74672556 (-)
LP/J	ENSMUSG00230030809	miRNA gene	ChrX:60340355-60340454 (-)
NOD/ShiLtJ	ENSMUSG00190013047	miRNA gene	ChrX:40782003-40782099 (-)
NZO/HlLtJ	ENSMUSG00225032707	miRNA gene	ChrX:65585820-65585919 (-)
PWK/PhJ	ENSLUMG00010042040	miRNA gene	ChrX:40614968-40615073 (-)
SPRET/EiJ	ENSMSPG00010004598	miRNA gene	ChrX:43331879-43331958 (-)
WSB/EiJ	ENSIUOG00005012069	miRNA gene	ChrX:41812031-41812119 (-)

Homology

• Gene Tree
  Gm54975
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075757 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075757	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020183508	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;