Gm54974 Gene Detail

Summary

• Symbol
  Gm54974
• Name
  predicted gene, 54974

• Feature Type
  miRNA gene
• IDs
  MGI:6846423
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:42607775-42607884 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  41

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846423	miRNA gene	Chr7:42607775-42607884 (+)
129S1/SvImJ	ENSMUSG00200009945	miRNA gene	Chr13:94898153-94898262 (-)
129S1/SvImJ	ENSMUSG00200026493	miRNA gene	Chr7:30116069-30116178 (-)
A/J	ENSMUSG00195022155	miRNA gene	Chr12:15736976-15737082 (-)
A/J	ENSMUSG00195050549	miRNA gene	Chr7:34233631-34233740 (+)
A/J	ENSMUSG00195022143	miRNA gene	Chr12:15109127-15109233 (-)
AKR/J	ENSMUSG00220032007	miRNA gene	Chr12:16343535-16343644 (-)
AKR/J	ENSMUSG00220001466	miRNA gene	Chr4:15232434-15232543 (+)
AKR/J	ENSMUSG00220053573	miRNA gene	Chr7:20822749-20822858 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175018492	miRNA gene	Chr13:96066663-96066772 (-)
C3H/HeJ	ENSMUSG00175042292	miRNA gene	Chr7:31548359-31548468 (+)
C3H/HeJ	ENSMUSG00175023320	miRNA gene	Chr12:20868880-20868986 (+)
C3H/HeJ	ENSMUSG00175006225	miRNA gene	Chr12:15123516-15123622 (-)
C57BL/6NJ	ENSMUSG00215007764	miRNA gene	Chr12:17024598-17024704 (+)
C57BL/6NJ	ENSMUSG00215045547	miRNA gene	Chr7:30781744-30781853 (-)
C57BL/6NJ	ENSMUSG00215007750	miRNA gene	Chr12:15780001-15780110 (+)
C57BL/6NJ	ENSMUSG00215036111	miRNA gene	Chr13:95979159-95979268 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006588	miRNA gene	Chr12:15975083-15975192 (+)
CAST/EiJ	ENSTCUG00005049368	miRNA gene	Chr7:34499525-34499634 (-)
CBA/J	ENSMUSG00210012134	miRNA gene	Chr13:95404096-95404205 (-)
CBA/J	ENSMUSG00210050178	miRNA gene	Chr7:31924851-31924960 (+)
DBA/2J	ENSMUSG00185050070	miRNA gene	Chr7:35726215-35726324 (-)
FVB/NJ	ENSMUSG00205038426	miRNA gene	Chr13:94869687-94869796 (-)
FVB/NJ	ENSMUSG00205049215	miRNA gene	Chr7:31546809-31546918 (+)
JF1/MsJ	ENSUMUG00000011766	miRNA gene	Chr12:14956872-14956978 (-)
JF1/MsJ	ENSUMUG00000012184	miRNA gene	Chr12:15582321-15582427 (-)
JF1/MsJ	ENSUMUG00000008115	miRNA gene	Chr12:22135156-22135262 (+)
JF1/MsJ	ENSUMUG00000054721	miRNA gene	Chr7:40212894-40213003 (-)
JF1/MsJ	ENSUMUG00000012118	miRNA gene	Chr12:19720562-19720668 (+)
LP/J	ENSMUSG00230051632	miRNA gene	Chr7:41083586-41083695 (-)
NOD/ShiLtJ	ENSMUSG00190008666	miRNA gene	Chr12:1040307-1040416 (+)
NOD/ShiLtJ	ENSMUSG00190051196	miRNA gene	Chr7:32067434-32067543 (+)
NOD/ShiLtJ	ENSMUSG00190045630	miRNA gene	Chr13:95729847-95729956 (-)
NZO/HlLtJ	ENSMUSG00225010464	miRNA gene	Chr7:39395672-39395781 (-)
NZO/HlLtJ	ENSMUSG00225035861	miRNA gene	Chr12:27556666-27556775 (-)
PWK/PhJ	ENSLUMG00010050966	miRNA gene	Chr7:30639083-30639192 (-)
PWK/PhJ	ENSLUMG00010005301	miRNA gene	Chr12:17825361-17825470 (+)
PWK/PhJ	ENSLUMG00010005236	miRNA gene	Chr12:14748235-14748341 (-)
PWK/PhJ	ENSLUMG00010005243	miRNA gene	Chr12:15377654-15377760 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005030693	miRNA gene	Chr7:31496343-31496452 (-)
WSB/EiJ	ENSIUOG00005037128	miRNA gene	Chr13:94730617-94730726 (-)

Homology

• Gene Tree
  Gm54974
  

Sequences &
Gene Models

• All Sequences
  43

• Ensembl
  ENSMUSG00002076157 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076157	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182535	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;