Gm54973 Gene Detail

Summary

• Symbol
  Gm54973
• Name
  predicted gene, 54973

• Feature Type
  rRNA gene
• IDs
  MGI:6846421
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:127525243-127525339 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846421	rRNA gene	Chr3:127525243-127525339 (+)
129S1/SvImJ	ENSMUSG00200003798	rRNA gene	Chr3:124269828-124269913 (+)
A/J	ENSMUSG00195008891	rRNA gene	Chr3:124408573-124408658 (+)
AKR/J	ENSMUSG00220022690	rRNA gene	Chr3:122839883-122839979 (+)
BALB/cJ	ENSMUSG00180003811	rRNA gene	Chr3:124335711-124335796 (+)
C3H/HeJ	ENSMUSG00175014605	rRNA gene	Chr3:123889385-123889470 (+)
C57BL/6NJ	ENSMUSG00215024152	rRNA gene	Chr3:124670778-124670874 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003970	rRNA gene	Chr3:124975752-124975837 (+)
CBA/J	ENSMUSG00210004313	rRNA gene	Chr3:124512586-124512671 (+)
DBA/2J	ENSMUSG00185027280	rRNA gene	Chr3:125123683-125123779 (+)
FVB/NJ	ENSMUSG00205029250	rRNA gene	Chr3:123468797-123468893 (+)
JF1/MsJ	ENSUMUG00000030230	rRNA gene	Chr3:123880952-123881037 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001575	rRNA gene	Chr3:125518986-125519082 (+)
NZO/HlLtJ	ENSMUSG00225004050	rRNA gene	Chr3:129558357-129558453 (+)
PWK/PhJ	ENSLUMG00010015536	rRNA gene	Chr3:123902238-123902323 (+)
SPRET/EiJ	ENSMSPG00010013962	rRNA gene	Chr3:124819960-124820056 (+)
WSB/EiJ	ENSIUOG00005017078	rRNA gene	Chr3:124688371-124688467 (+)

Homology

• Gene Tree
  Gm54973
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075442 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075442	Ensembl Gene Model | MGI Sequence Detail	97	C57BL/6J
transcript	ENSMUST00020183196	Ensembl | MGI Sequence Detail	97	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;