Gm54965 Gene Detail

Summary

• Symbol
  Gm54965
• Name
  predicted gene, 54965

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846405
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:67858602-67858878 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846405	unclassified non-coding RNA gene	Chr17:67858602-67858878 (+)
129S1/SvImJ	ENSMUSG00200039643	unclassified non-coding RNA gene	Chr17:63208747-63209023 (+)
A/J	ENSMUSG00195019123	unclassified non-coding RNA gene	Chr17:64551125-64551401 (+)
AKR/J	ENSMUSG00220019003	unclassified non-coding RNA gene	Chr17:63623640-63623916 (+)
BALB/cJ	ENSMUSG00180021260	unclassified non-coding RNA gene	Chr17:64288430-64288706 (+)
C3H/HeJ	ENSMUSG00175032279	unclassified non-coding RNA gene	Chr17:63595880-63596156 (+)
C57BL/6NJ	ENSMUSG00215032231	unclassified non-coding RNA gene	Chr17:63248495-63248771 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027272	unclassified non-coding RNA gene	Chr17:64177561-64177837 (+)
CBA/J	ENSMUSG00210031235	unclassified non-coding RNA gene	Chr17:63395721-63395997 (+)
DBA/2J	ENSMUSG00185023176	unclassified non-coding RNA gene	Chr17:66240257-66240533 (+)
FVB/NJ	ENSMUSG00205018716	unclassified non-coding RNA gene	Chr17:64021983-64022259 (+)
JF1/MsJ	ENSUMUG00000040099	unclassified non-coding RNA gene	Chr17:65899096-65899376 (+)
LP/J	ENSMUSG00230017113	unclassified non-coding RNA gene	Chr17:67226932-67227208 (+)
NOD/ShiLtJ	ENSMUSG00190041990	unclassified non-coding RNA gene	Chr17:63379190-63379466 (+)
NZO/HlLtJ	ENSMUSG00225026131	unclassified non-coding RNA gene	Chr17:69507374-69507650 (+)
PWK/PhJ	ENSLUMG00010031795	unclassified non-coding RNA gene	Chr17:63169026-63169306 (+)
SPRET/EiJ	ENSMSPG00010018472	unclassified non-coding RNA gene	Chr17:63551272-63551529 (+)
WSB/EiJ	ENSIUOG00005033049	unclassified non-coding RNA gene	Chr17:64253030-64253306 (+)

Homology

• Gene Tree
  Gm54965
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075726 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075726	Ensembl Gene Model | MGI Sequence Detail	277	C57BL/6J
transcript	ENSMUST00020182901	Ensembl | MGI Sequence Detail	277	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;