Gm54963 Gene Detail

Summary

• Symbol
  Gm54963
• Name
  predicted gene, 54963

• Feature Type
  rRNA gene
• IDs
  MGI:6846401
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:48352217-48352329 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846401	rRNA gene	Chr8:48352217-48352329 (+)
129S1/SvImJ	ENSMUSG00200006759	rRNA gene	Chr8:43442057-43442169 (+)
A/J	ENSMUSG00195004408	rRNA gene	Chr8:43970576-43970688 (+)
AKR/J	ENSMUSG00220004610	rRNA gene	Chr8:43772035-43772147 (+)
BALB/cJ	ENSMUSG00180002961	rRNA gene	Chr8:43511543-43511655 (+)
C3H/HeJ	ENSMUSG00175005276	rRNA gene	Chr8:43633103-43633215 (+)
C57BL/6NJ	ENSMUSG00215011812	rRNA gene	Chr8:43442640-43442752 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020404	rRNA gene	Chr8:43460144-43460256 (+)
CBA/J	ENSMUSG00210019362	rRNA gene	Chr8:43510691-43510803 (+)
DBA/2J	ENSMUSG00185006073	rRNA gene	Chr8:49397083-49397195 (+)
FVB/NJ	ENSMUSG00205002886	rRNA gene	Chr8:42640405-42640517 (+)
JF1/MsJ	ENSUMUG00000005780	rRNA gene	Chr8:51005262-51005374 (+)
LP/J	ENSMUSG00230018068	rRNA gene	Chr8:53049452-53049564 (+)
NOD/ShiLtJ	ENSMUSG00190006734	rRNA gene	Chr8:43548698-43548810 (+)
NZO/HlLtJ	ENSMUSG00225012136	rRNA gene	Chr8:56638101-56638213 (+)
PWK/PhJ	ENSLUMG00010010101	rRNA gene	Chr8:43287582-43287694 (+)
SPRET/EiJ	ENSMSPG00010006370	rRNA gene	Chr8:44165598-44165710 (+)
WSB/EiJ	ENSIUOG00005002662	rRNA gene	Chr8:44371403-44371515 (+)

Homology

• Gene Tree
  Gm54963
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075471 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075471	Ensembl Gene Model | MGI Sequence Detail	113	C57BL/6J
transcript	ENSMUST00020182395	Ensembl | MGI Sequence Detail	113	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;