Gm54962 Gene Detail

Summary

• Symbol
  Gm54962
• Name
  predicted gene, 54962

• Feature Type
  miRNA gene
• IDs
  MGI:6846399
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:61400216-61400285 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846399	miRNA gene	Chr7:61400216-61400285 (-)
129S1/SvImJ	ENSMUSG00200009077	miRNA gene	Chr7:48133102-48133171 (-)
A/J	ENSMUSG00195013940	miRNA gene	Chr7:52553525-52553594 (-)
AKR/J	ENSMUSG00220011903	miRNA gene	Chr7:46061835-46061904 (-)
BALB/cJ	ENSMUSG00180010974	miRNA gene	Chr7:49269138-49269207 (-)
C3H/HeJ	ENSMUSG00175003405	miRNA gene	Chr7:50015742-50015811 (-)
C57BL/6NJ	ENSMUSG00215002061	miRNA gene	Chr7:49183513-49183582 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012378	miRNA gene	Chr7:52813080-52813149 (-)
CBA/J	ENSMUSG00210017488	miRNA gene	Chr7:49917383-49917452 (-)
DBA/2J	ENSMUSG00185006716	miRNA gene	Chr7:54296797-54296866 (-)
FVB/NJ	ENSMUSG00205001522	miRNA gene	Chr7:49846884-49846953 (-)
JF1/MsJ	ENSUMUG00000014725	miRNA gene	Chr7:59013578-59013647 (-)
LP/J	ENSMUSG00230020517	miRNA gene	Chr7:60268574-60268643 (-)
NOD/ShiLtJ	ENSMUSG00190003806	miRNA gene	Chr7:50026126-50026195 (-)
NZO/HlLtJ	ENSMUSG00225010391	miRNA gene	Chr7:58563956-58564025 (-)
PWK/PhJ	ENSLUMG00010002355	miRNA gene	Chr7:48568163-48568232 (-)
SPRET/EiJ	ENSMSPG00010001528	miRNA gene	Chr7:48838041-48838110 (-)
WSB/EiJ	ENSIUOG00005005162	miRNA gene	Chr7:50414605-50414674 (-)

Homology

• Gene Tree
  Gm54962
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075559 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075559	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020182167	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;