Gm54961 Gene Detail

Summary

• Symbol
  Gm54961
• Name
  predicted gene, 54961

• Feature Type
  miRNA gene
• IDs
  MGI:6846397
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:61383433-61383530 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  275 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846397	miRNA gene	Chr7:61383433-61383530 (-)
129S1/SvImJ	ENSMUSG00200008989	miRNA gene	Chr7:48110292-48110389 (-)
A/J	ENSMUSG00195013486	miRNA gene	Chr7:52536742-52536839 (-)
AKR/J	ENSMUSG00220011873	miRNA gene	Chr7:46039024-46039121 (-)
BALB/cJ	ENSMUSG00180011077	miRNA gene	Chr7:49239875-49239972 (-)
C3H/HeJ	ENSMUSG00175003569	miRNA gene	Chr7:49992932-49993029 (-)
C57BL/6NJ	ENSMUSG00215002048	miRNA gene	Chr7:49166730-49166827 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012355	miRNA gene	Chr7:52774377-52774474 (-)
CBA/J	ENSMUSG00210017627	miRNA gene	Chr7:49894573-49894670 (-)
DBA/2J	ENSMUSG00185006540	miRNA gene	Chr7:54274993-54275089 (-)
FVB/NJ	ENSMUSG00205001503	miRNA gene	Chr7:49830101-49830198 (-)
JF1/MsJ	ENSUMUG00000016296	miRNA gene	Chr7:58991772-58991868 (-)
LP/J	ENSMUSG00230020541	miRNA gene	Chr7:60245764-60245861 (-)
NOD/ShiLtJ	ENSMUSG00190003687	miRNA gene	Chr7:50003316-50003413 (-)
NZO/HlLtJ	ENSMUSG00225010237	miRNA gene	Chr7:58547173-58547270 (-)
PWK/PhJ	ENSLUMG00010002472	miRNA gene	Chr7:48546360-48546456 (-)
SPRET/EiJ	ENSMSPG00010001574	miRNA gene	Chr7:48823124-48823221 (-)
WSB/EiJ	ENSIUOG00005005033	miRNA gene	Chr7:50391795-50391892 (-)

Homology

• Gene Tree
  Gm54961
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076260 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076260	Ensembl Gene Model | MGI Sequence Detail	98	C57BL/6J
transcript	ENSMUST00020183752	Ensembl | MGI Sequence Detail	98	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;