Gm54959 Gene Detail

Summary

• Symbol
  Gm54959
• Name
  predicted gene, 54959

• Feature Type
  snRNA gene
• IDs
  MGI:6846393
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:81319476-81319583 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846393	snRNA gene	Chr7:81319476-81319583 (+)
129S1/SvImJ	ENSMUSG00200035688	snRNA gene	Chr7:68139838-68139945 (+)
A/J	ENSMUSG00195043975	snRNA gene	Chr7:72566043-72566150 (+)
AKR/J	ENSMUSG00220040570	snRNA gene	Chr7:66100864-66100971 (+)
BALB/cJ	ENSMUSG00180013463	snRNA gene	Chr7:69283935-69284042 (+)
C3H/HeJ	ENSMUSG00175021924	snRNA gene	Chr7:70051933-70052040 (+)
C57BL/6NJ	ENSMUSG00215029204	snRNA gene	Chr7:69147166-69147273 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046865	snRNA gene	Chr7:72610873-72610980 (+)
CBA/J	ENSMUSG00210024331	snRNA gene	Chr7:69903079-69903186 (+)
DBA/2J	ENSMUSG00185048443	snRNA gene	Chr7:74225882-74225989 (+)
FVB/NJ	ENSMUSG00205030346	snRNA gene	Chr7:69801944-69802051 (+)
JF1/MsJ	ENSUMUG00000033028	snRNA gene	Chr7:78895756-78895863 (+)
LP/J	ENSMUSG00230016081	snRNA gene	Chr7:80315130-80315237 (+)
NOD/ShiLtJ	ENSMUSG00190019815	snRNA gene	Chr7:70045373-70045480 (+)
NZO/HlLtJ	ENSMUSG00225042264	snRNA gene	Chr7:78561773-78561880 (+)
PWK/PhJ	ENSLUMG00010017894	snRNA gene	Chr7:68489103-68489210 (+)
SPRET/EiJ	ENSMSPG00010025674	snRNA gene	Chr7:68897701-68897808 (+)
WSB/EiJ	ENSIUOG00005022090	snRNA gene	Chr7:70389122-70389229 (+)

Homology

• Gene Tree
  Gm54959
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076632 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076632	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020183635	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;