Gm54957 Gene Detail

Summary

• Symbol
  Gm54957
• Name
  predicted gene, 54957

• Feature Type
  miRNA gene
• IDs
  MGI:6846389
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:84883386-84883506 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846389	miRNA gene	Chr8:84883386-84883506 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195020100	miRNA gene	Chr8:79612003-79612123 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175011097	miRNA gene	Chr8:79542423-79542543 (+)
C57BL/6NJ	ENSMUSG00215028386	miRNA gene	Chr8:79178413-79178533 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037466	miRNA gene	Chr8:79063071-79063181 (+)
CBA/J	ENSMUSG00210020356	miRNA gene	Chr8:79534859-79534979 (+)
DBA/2J	ENSMUSG00185040288	miRNA gene	Chr8:85643470-85643590 (+)
FVB/NJ	ENSMUSG00205041680	miRNA gene	Chr8:78589662-78589782 (+)
JF1/MsJ	ENSUMUG00000036523	miRNA gene	Chr8:87944507-87944627 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190030499	miRNA gene	Chr8:79608325-79608445 (+)
NZO/HlLtJ	ENSMUSG00225040857	miRNA gene	Chr8:92639382-92639502 (+)
PWK/PhJ	ENSLUMG00010031321	miRNA gene	Chr8:79289962-79290082 (+)
SPRET/EiJ	ENSMSPG00010033765	miRNA gene	Chr8:81202903-81203023 (+)
SPRET/EiJ	ENSMSPG00010018858	miRNA gene	Chr17:62996942-62997059 (+)
SPRET/EiJ	ENSMSPG00010007132	miRNA gene	Chr13:113237034-113237162 (-)
WSB/EiJ	ENSIUOG00005016329	miRNA gene	Chr8:80348103-80348223 (+)

Homology

• Gene Tree
  Gm54957
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075294 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075294	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183043	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;