Gm54956 Gene Detail

Summary

• Symbol
  Gm54956
• Name
  predicted gene, 54956

• Feature Type
  miRNA gene
• IDs
  MGI:6846387
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:111283398-111283494 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846387	miRNA gene	Chr8:111283398-111283494 (-)
129S1/SvImJ	ENSMUSG00200015212	miRNA gene	Chr8:105587156-105587252 (-)
A/J	ENSMUSG00195021252	miRNA gene	Chr8:105899734-105899829 (-)
AKR/J	ENSMUSG00220015377	miRNA gene	Chr8:106042157-106042253 (-)
BALB/cJ	ENSMUSG00180026111	miRNA gene	Chr8:105905191-105905272 (-)
C3H/HeJ	ENSMUSG00175026188	miRNA gene	Chr8:105962064-105962160 (-)
C57BL/6NJ	ENSMUSG00215037087	miRNA gene	Chr8:105565094-105565189 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035167	miRNA gene	Chr8:105316385-105316466 (-)
CBA/J	ENSMUSG00210036244	miRNA gene	Chr8:105889232-105889328 (-)
DBA/2J	ENSMUSG00185018433	miRNA gene	Chr8:111998353-111998449 (-)
FVB/NJ	ENSMUSG00205024949	miRNA gene	Chr8:104901679-104901775 (-)
JF1/MsJ	ENSUMUG00000019891	miRNA gene	Chr8:114331633-114331729 (-)
LP/J	ENSMUSG00230036549	miRNA gene	Chr8:115678170-115678266 (-)
NOD/ShiLtJ	ENSMUSG00190028937	miRNA gene	Chr8:106040233-106040331 (-)
NZO/HlLtJ	ENSMUSG00225023319	miRNA gene	Chr8:119028845-119028941 (-)
PWK/PhJ	ENSLUMG00010029005	miRNA gene	Chr8:105774822-105774918 (-)
SPRET/EiJ	ENSMSPG00010041342	miRNA gene	Chr8:107880845-107880940 (-)
WSB/EiJ	ENSIUOG00005033345	miRNA gene	Chr8:106693475-106693556 (-)

Homology

• Gene Tree
  Gm54956
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075459 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075459	Ensembl Gene Model | MGI Sequence Detail	97	C57BL/6J
transcript	ENSMUST00020182253	Ensembl | MGI Sequence Detail	97	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;