Gm54955 Gene Detail

Summary

• Symbol
  Gm54955
• Name
  predicted gene, 54955

• Feature Type
  miRNA gene
• IDs
  MGI:6846385
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:111225617-111225676 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846385	miRNA gene	Chr8:111225617-111225676 (+)
129S1/SvImJ	ENSMUSG00200015201	miRNA gene	Chr8:105529363-105529422 (+)
A/J	ENSMUSG00195021237	miRNA gene	Chr8:105841942-105842001 (+)
AKR/J	ENSMUSG00220015367	miRNA gene	Chr8:105984352-105984411 (+)
BALB/cJ	ENSMUSG00180026060	miRNA gene	Chr8:105847663-105847722 (+)
C3H/HeJ	ENSMUSG00175026160	miRNA gene	Chr8:105904278-105904337 (+)
C57BL/6NJ	ENSMUSG00215037043	miRNA gene	Chr8:105507300-105507359 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035129	miRNA gene	Chr8:105259123-105259182 (+)
CBA/J	ENSMUSG00210036197	miRNA gene	Chr8:105831481-105831540 (+)
DBA/2J	ENSMUSG00185018413	miRNA gene	Chr8:111940556-111940615 (+)
FVB/NJ	ENSMUSG00205024873	miRNA gene	Chr8:104843868-104843927 (+)
JF1/MsJ	ENSUMUG00000019860	miRNA gene	Chr8:114273839-114273898 (+)
LP/J	ENSMUSG00230036580	miRNA gene	Chr8:115620390-115620449 (+)
NOD/ShiLtJ	ENSMUSG00190028898	miRNA gene	Chr8:105982452-105982511 (+)
NZO/HlLtJ	ENSMUSG00225023337	miRNA gene	Chr8:118971060-118971119 (+)
PWK/PhJ	ENSLUMG00010028950	miRNA gene	Chr8:105717131-105717190 (+)
SPRET/EiJ	ENSMSPG00010041274	miRNA gene	Chr8:107824442-107824501 (+)
WSB/EiJ	ENSIUOG00005033307	miRNA gene	Chr8:106636246-106636305 (+)

Homology

• Gene Tree
  Gm54955
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075592 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075592	Ensembl Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	ENSMUST00020183300	Ensembl | MGI Sequence Detail	60	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;