Gm54948 Gene Detail

Summary

• Symbol
  Gm54948
• Name
  predicted gene, 54948

• Feature Type
  snRNA gene
• IDs
  MGI:6846371
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:82374102-82374231 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846371	snRNA gene	Chr18:82374102-82374231 (-)
129S1/SvImJ	ENSMUSG00200028931	snRNA gene	Chr18:79592519-79592648 (-)
A/J	ENSMUSG00195004870	snRNA gene	Chr18:79678472-79678601 (-)
AKR/J	ENSMUSG00220017406	snRNA gene	Chr18:79601600-79601729 (-)
BALB/cJ	ENSMUSG00180013756	snRNA gene	Chr18:80248814-80248943 (-)
C3H/HeJ	ENSMUSG00175013438	snRNA gene	Chr18:79789020-79789149 (-)
C57BL/6NJ	ENSMUSG00215024991	snRNA gene	Chr18:79167872-79168001 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030398	snRNA gene	Chr18:78693214-78693360 (-)
CBA/J	ENSMUSG00210036535	snRNA gene	Chr18:79739483-79739612 (-)
DBA/2J	ENSMUSG00185011711	snRNA gene	Chr18:79644775-79644904 (-)
FVB/NJ	ENSMUSG00205017496	snRNA gene	Chr18:79052857-79052986 (-)
JF1/MsJ	ENSUMUG00000035996	snRNA gene	Chr18:79537281-79537427 (-)
LP/J	ENSMUSG00230014641	snRNA gene	Chr18:81694726-81694855 (-)
NOD/ShiLtJ	ENSMUSG00190022943	snRNA gene	Chr18:79469935-79470064 (-)
NZO/HlLtJ	ENSMUSG00225035234	snRNA gene	Chr18:81569591-81569720 (-)
PWK/PhJ	ENSLUMG00010007220	snRNA gene	Chr18:79917342-79917471 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005008470	snRNA gene	Chr18:79103182-79103311 (-)

Homology

• Gene Tree
  Gm54948
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075868 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075868	Ensembl Gene Model | MGI Sequence Detail	130	C57BL/6J
transcript	ENSMUST00020182570	Ensembl | MGI Sequence Detail	130	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;