Gm54947 Gene Detail

Summary

• Symbol
  Gm54947
• Name
  predicted gene, 54947

• Feature Type
  miRNA gene
• IDs
  MGI:6846369
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:82817167-82817219 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846369	miRNA gene	Chr1:82817167-82817219 (+)
129S1/SvImJ	ENSMUSG00200035350	miRNA gene	Chr1:80491233-80491285 (+)
A/J	ENSMUSG00195010550	miRNA gene	Chr1:79893704-79893756 (+)
AKR/J	ENSMUSG00220010531	miRNA gene	Chr1:80088268-80088320 (+)
BALB/cJ	ENSMUSG00180020525	miRNA gene	Chr1:80165419-80165471 (+)
C3H/HeJ	ENSMUSG00175018603	miRNA gene	Chr1:80299868-80299920 (+)
C57BL/6NJ	ENSMUSG00215028461	miRNA gene	Chr1:80213593-80213645 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029277	miRNA gene	Chr1:79883348-79883400 (+)
CBA/J	ENSMUSG00210041451	miRNA gene	Chr1:80085780-80085832 (+)
DBA/2J	ENSMUSG00185032874	miRNA gene	Chr1:81122244-81122296 (+)
FVB/NJ	ENSMUSG00205040368	miRNA gene	Chr1:79636325-79636377 (+)
JF1/MsJ	ENSUMUG00000006176	miRNA gene	Chr1:79928975-79929027 (+)
LP/J	ENSMUSG00230013578	miRNA gene	Chr1:81058422-81058474 (+)
NOD/ShiLtJ	ENSMUSG00190041678	miRNA gene	Chr1:80289327-80289379 (+)
NZO/HlLtJ	ENSMUSG00225004593	miRNA gene	Chr1:84303741-84303793 (+)
PWK/PhJ	ENSLUMG00010013607	miRNA gene	Chr1:79553630-79553682 (+)
SPRET/EiJ	ENSMSPG00010019966	miRNA gene	Chr1:81693327-81693379 (+)
WSB/EiJ	ENSIUOG00005014298	miRNA gene	Chr1:79856547-79856599 (+)

Homology

• Gene Tree
  Gm54947
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074851 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074851	Ensembl Gene Model | MGI Sequence Detail	53	C57BL/6J
transcript	ENSMUST00020182523	Ensembl | MGI Sequence Detail	53	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;